| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4366 |
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| Symbol | |
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| ID | 5610745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5344167 |
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| End bp | 5345633 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640935336 |
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| Product | hypothetical protein |
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| Protein accession | YP_001476096 |
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| Protein GI | 157377496 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATATG CTCGCAATAC ACGCCGTTGG TTATCGATAC TACTCCCGCT CGTCGCGGTG
ATAAGCCTAT CGTGGACATC AACAGCAAAC GCTGAAGCAA AAGCGCTAAT ATTAAAACCC
TTCAAACAGT TAAGTGATGA AAGTGCAGAG TGCGCCGCCT GTCACAAAGA AAAAAACCCT
TCTATCTATG GCCAATGGGG CAGATCAAAG CATTACGGCG CTAACGTCGG TTGTTATGAA
TGTCACGCCG CGGATAAAGG TGATAAAGAT GCAATAACGC ACGAAGGCCG TCTGATTTCG
GTCATCGTCT CACCAAAAGA TTGCTCTCAA TGTCACAATC AGGAAGTAGA GCAGTTCACT
AAGAGTCACC ACGCTAAAGC CGGTAAGATC ATGGGCTCAC TCGATAACTT CCTTGCTGAA
GTTGTTGAAG GTGCAATGAC TTTTAATGGT AAGTCACCTG CAGCCGTCAA CGGATGTTGG
CAGTGTCATG GTTCTGAGGT CAAAGTATTG CCTAATGGCG ATCTCGATCC AACCACTTGG
CCAAACACAG GTATCGGTCG AATCAACCCG GACGGATCAA TTGGTGCATG TACAGCTTGT
CACCAACGTC ATGAATTCTC TATGGTTCAA GCTCGTCGTC CCGAAGCATG TGGTAAGTGT
CACTTAGGTC CGGATCATCC GCAAAAAGAG GTGTATGACG AATCTAAGCA CGGTATTAAC
TTCTATGCCA ATGTCGACCG TATGAATCTC GATTCATCTA AGTGGATTGC GGGTGAAGAC
TATGACGCGG CGCCAACCTG TGCAACCTGT CATATGTCTG CTACACGTGA GCAAGCAGTG
ACTCACGATG TGGGCGACCG TATCAGCTGG ACATTAAGAC CGGCTGTTTC AGAGAAGATC
GATGCTAAAG CTCTCGCACA AGGCCACAAG GTCAAGAGCT GGCAAGATAG ACGTGCCGAC
ATGCAGGATG TTTGTCAGTC TTGTCACACT AAGTCGGTGA CAGATAATTT CTATCAACAG
TTCGATTCTC TGGTCAATCT GTATAACGAT AAGTTTGCAG GCCCAGGTAA GTCTCTGATG
GATATGTTGA AGAAAGAGAA GATGCTAACA GAAACGGCTT TCGATGAAGA GATCGAATGG
ACCTGGTTCT TCCTCTGGCA CCATGAAGGT CGACGTGCAC GTCACGGCGC AGCTATGCAA
GCACCTGACT ATGTACAATG GCATGGTATG TTTGAAGTGG CCGAGCGTTT CTACATCGAG
ATGGTACCTC AGTACCTGGA AGTGGTAGAG AAAGCCGAGC ACAGTGGCAA TACTCAAGGC
GCAGAAAAAG CACGTAAGCT CCTCGAAGAG ATTCTATCTC GCCCTGAGCA TGCATGGTTT
ACAGGTAATG AGCCCGATGA GGTGAAAAAA GCCCGTAAAG CCGCGCAAAA AGAGTTTAAA
GCACGCTACC TGAGTGAAAG CAAATAG
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| Protein sequence | MEYARNTRRW LSILLPLVAV ISLSWTSTAN AEAKALILKP FKQLSDESAE CAACHKEKNP
SIYGQWGRSK HYGANVGCYE CHAADKGDKD AITHEGRLIS VIVSPKDCSQ CHNQEVEQFT
KSHHAKAGKI MGSLDNFLAE VVEGAMTFNG KSPAAVNGCW QCHGSEVKVL PNGDLDPTTW
PNTGIGRINP DGSIGACTAC HQRHEFSMVQ ARRPEACGKC HLGPDHPQKE VYDESKHGIN
FYANVDRMNL DSSKWIAGED YDAAPTCATC HMSATREQAV THDVGDRISW TLRPAVSEKI
DAKALAQGHK VKSWQDRRAD MQDVCQSCHT KSVTDNFYQQ FDSLVNLYND KFAGPGKSLM
DMLKKEKMLT ETAFDEEIEW TWFFLWHHEG RRARHGAAMQ APDYVQWHGM FEVAERFYIE
MVPQYLEVVE KAEHSGNTQG AEKARKLLEE ILSRPEHAWF TGNEPDEVKK ARKAAQKEFK
ARYLSESK
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