| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4362 |
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| Symbol | |
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| ID | 5610941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5338899 |
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| End bp | 5340440 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640935332 |
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| Product | phosphoenolpyruvate carboxykinase |
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| Protein accession | YP_001476092 |
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| Protein GI | 157377492 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1866] Phosphoenolpyruvate carboxykinase (ATP) |
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| TIGRFAM ID | [TIGR00224] phosphoenolpyruvate carboxykinase (ATP) |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGATG GAACACACAG TACTCACCGT AACCCCTCAA CGGCACAACT CATTGAACTT
GCTCTATCCA GAGGAGAAGG TGAACTGACT GCAAATGGTG CACTAGTCGC AAAAACCGGT
GAACGTACCG GGCGCTCGCC TAACGATCGT TTTATCGTTA AAGAGCCTGG CTCGGAAGCA
GATATCGATT GGGGAACAGT CAACAAGCCT TTCGAACAAA CCGTATTTAC CGCGCTATGG
AACAGAGTCG AGTCCTACCT GGGCGACAAA GAGCTATTTG TCTCTGACCT GGAAGTCGGT
GCAGATCCTG AACATTATCA ACCGGTACGA GTCACCACCG AAACGGCTTG GCATCAGCTG
TTTGCTCGTA ACCTCTTTAT CGTTCCTGAG CAATTTAACG CTGCCGATAA GCCTATCTGG
CAGATCATGA ACGCGCCGGG TTTTGAATGC ATACCAGAAA GAGACGGCAC TCACTCCGAT
GCGACCGTGA TCATCAACTT TGCCGAGCGC AAAGTACTCC TTGCCGGCCT TAAATACGCC
GGTGAGATGA AAAAATCTAT GTTCTCGGTA CAAAACTTCC TTCTTCCGGC AAAGGGTGTG
CTCCCTATGC ACTGCTCGGC TAACGTTGGA ATCAAAGGCG ATACAACACT CTTCTTCGGT
CTGTCGGGCA CAGGCAAGAC CACACTGTCG GCCGATCCTA AGCGCTTTCT AATCGGCGAC
GACGAGCACG GTTGGGCACC CGGCGGCGTT TTCAACATCG AAGGTGGCTG TTACGCAAAG
TGTATCGATT TGAGTCAGAA AAATGAGCCC GTTATCTGGA ATGCGATCCG CTTCGGAACC
GTACTCGAAA ACGTCACCAT GGATGAGAAC CGAGTTCCGG ACTACACCGA CTCAACCCTG
ACAGAGAACA GTCGCGCCGC TTACCCGCTA GAGCATATCG AGCTGCGTAA AGAGGAAAAC
CTTGGCGCAG AGCCCCATGC CGTGGTCTTC CTGACCTGTG ATGTTTCGGG TGTCTTACCG
CCGGTATCCA TACTCACTAA AGAGCAGGCG GCCTACCACT TCCTATCGGG TTATACGGCG
AAGGTCGGCT CGACTGAGAT GGGCTCCAGC TCCGCGATAC AATCAACCTT CTCTACTTGC
TTCGGTGCAC CTTTTTTCCC TCGTCCGGCA GGTGTTTACG CCGAGCTGTT GATGAAGCGT
ATCGAATCGT TCGGTAGCCA AGTTTATCTG GTTAATACCG GTTGGACTGG CGGTCCTCAC
GGTATCGGCA AGCGTTTCGA TATACCAACG ACCCGAGCGA TCGTAGATGC GATTGTTAAT
GATGATCTAA AGGGGGTCGA GACTGAACAT CTGGCTAAGC TGAATCTGAA TGTCCCCCTC
GCCATTCCGG GCGTTGAGAC CAAGCTGCTT AACCCGGTGA ATACCTGGGA AGACAAGGCT
AAGTATGCAG AGTATGCACA ACAACTAGCC GAGAGCTTCA CTGAGAACTT TGCTAAATAC
CAGGTACCGG ATTCGATTAA GAACGCCGGA CCTAATGCTT AG
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| Protein sequence | MADGTHSTHR NPSTAQLIEL ALSRGEGELT ANGALVAKTG ERTGRSPNDR FIVKEPGSEA
DIDWGTVNKP FEQTVFTALW NRVESYLGDK ELFVSDLEVG ADPEHYQPVR VTTETAWHQL
FARNLFIVPE QFNAADKPIW QIMNAPGFEC IPERDGTHSD ATVIINFAER KVLLAGLKYA
GEMKKSMFSV QNFLLPAKGV LPMHCSANVG IKGDTTLFFG LSGTGKTTLS ADPKRFLIGD
DEHGWAPGGV FNIEGGCYAK CIDLSQKNEP VIWNAIRFGT VLENVTMDEN RVPDYTDSTL
TENSRAAYPL EHIELRKEEN LGAEPHAVVF LTCDVSGVLP PVSILTKEQA AYHFLSGYTA
KVGSTEMGSS SAIQSTFSTC FGAPFFPRPA GVYAELLMKR IESFGSQVYL VNTGWTGGPH
GIGKRFDIPT TRAIVDAIVN DDLKGVETEH LAKLNLNVPL AIPGVETKLL NPVNTWEDKA
KYAEYAQQLA ESFTENFAKY QVPDSIKNAG PNA
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