| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4353 |
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| Symbol | |
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| ID | 5609798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5329524 |
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| End bp | 5329895 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640935323 |
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| Product | general secretion pathway protein I |
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| Protein accession | YP_001476083 |
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| Protein GI | 157377483 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAATCATA GCGTTAAGGG CATGACCTTA CTCGAAGTTA TCGTTGCTTT AGCCGTATTT
GCCATTGCTG CGGTGTCGAT CACTAAGAGC CTGGGAGATC AAATTGCCAA CATGCCAATC
TTAGAGGAGC GGACCTATGC GCAATGGGTC GCCGACAATG AGATGGTCGA GGCGAGACTG
GAGCCGAAGT TTCCTGATAT CGGTAAGAAA GAGGGGGAAA CTGAACTGGC TGGTCGAGAT
TGGTATTGGC GTAAAGAGGT GGTAAAAACC ACGGATGATA AATTCAGAAT GATCCGCATC
AGCGTCAGTG ATGATGAGCG ATATCAACGT ATTCTTGCCC AGGTAAGTAG TTATGTACTC
AATCAAGACT AG
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| Protein sequence | MNHSVKGMTL LEVIVALAVF AIAAVSITKS LGDQIANMPI LEERTYAQWV ADNEMVEARL
EPKFPDIGKK EGETELAGRD WYWRKEVVKT TDDKFRMIRI SVSDDERYQR ILAQVSSYVL
NQD
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