| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4349 |
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| Symbol | |
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| ID | 5613186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5326035 |
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| End bp | 5326511 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640935319 |
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| Product | general secretion pathway M protein |
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| Protein accession | YP_001476079 |
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| Protein GI | 157377479 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3149] Type II secretory pathway, component PulM |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.482312 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAACC TTAAAGCGTG GTGGAACGGC CTAATCTTGC GAGAGCAGCA ACTGGTCGGA
ACTTGTGCTG TCGTGCTGGT TATCGGCATA TTTTATTGGG GGATCTGGAC TCCGATATCG
AATGCAGAAA TTGATGCCGA GCGTCGATTG CAGGCACAAG AGAGCACATT GAATTTTGTT
AAGCAAACCG CAAATAAAAT CGCGGGTTTG AAGCAAAGCG GTACTCAATC AAAGTTTAAC
GGTAGTTTAA GTGCCGCCGT TAACCTGAGT GCGGGAGCCT TTGGATTAGA GATAACGCGT
ATGCAGCCTC AGGGTAACAA GATCCAGCTA TGGATGGACG ATGTCCCGTT CGATGCGTTG
CTTGGATATT TGAATGAATT GGTTCAGGAG AAAGGGTTAT CGTTAGATAG CATAGATCTT
GCTGAATCGG ATGTGCCTGG ATTAGTCCGT GTTCGTCGTA TTCAGCTATC ACAATGA
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| Protein sequence | MENLKAWWNG LILREQQLVG TCAVVLVIGI FYWGIWTPIS NAEIDAERRL QAQESTLNFV
KQTANKIAGL KQSGTQSKFN GSLSAAVNLS AGAFGLEITR MQPQGNKIQL WMDDVPFDAL
LGYLNELVQE KGLSLDSIDL AESDVPGLVR VRRIQLSQ
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