| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4348 |
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| Symbol | |
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| ID | 5613143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5325196 |
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| End bp | 5325954 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640935318 |
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| Product | type II secretion system protein N |
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| Protein accession | YP_001476078 |
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| Protein GI | 157377478 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.507417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAATTTAG CAAAGAAAGT TATTATTGGT GTGTTGATCT ATTTGGTTTT TTTGATCGCA
TTATTACCGG CAAGTGTCGT CGTCAGGCTA GCACCATTAC CTAATACGAT AAGTTTGAGT
GGAGTTTCCG GTTCGATATG GTCGGGAAGT GTTGAGACGG TTACGATTCA AAAGAGACAG
CTGGAGCAGG TGCAGTGGGA GCTGAGTCCC TGGGCTCTGT TTCTCGGCAA AGCTAAGTTA
GATCTTGTGA TTGGTAACCG TGCTAGCGCG GTTAACGGCA AAGGTCAGGT GACACTTTCT
ATGAGCGGCA TCAAGGCGCA AGGATTACGA TTTGAAGCCC CGGGAAGTTT CCTGATCGGC
AATACCAGGT TACCGTTTCG CACTAAAATT GGTGGTGATA TCAGCCTGTT CATCGAGGAG
CTAGCTCAAG GTCAGCCTTG GTGTGAGCAG TTAACCGGTA AAGTCTTCCT TAACAGTGCC
AAGGTGAAAA ATCAGTTCGG TGATTATCCC TTGGGTGATA TCGAACTGGG CTTAAGCTGT
GTCGATGGTA ATGTTAATGT GAACTCCGAT GAAACGATGA ACCAGCTCGG CTTAAGCGGC
ACCGTGTTAG TGAAGGGAGA GAAGATGGTA AAGGTTTCGG CTAAGATCAA AGAGACACCA
TCTCAACCTG AAGATCTGAA GAAAGCACTT AGCTTCTTAG GTAAGAAAGA TAGCCAAGGG
TATTATCCGA TTAGTTATCA AGGACGAATC CCTTTGTAG
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| Protein sequence | MNLAKKVIIG VLIYLVFLIA LLPASVVVRL APLPNTISLS GVSGSIWSGS VETVTIQKRQ
LEQVQWELSP WALFLGKAKL DLVIGNRASA VNGKGQVTLS MSGIKAQGLR FEAPGSFLIG
NTRLPFRTKI GGDISLFIEE LAQGQPWCEQ LTGKVFLNSA KVKNQFGDYP LGDIELGLSC
VDGNVNVNSD ETMNQLGLSG TVLVKGEKMV KVSAKIKETP SQPEDLKKAL SFLGKKDSQG
YYPISYQGRI PL
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