| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4343 |
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| Symbol | |
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| ID | 5611722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5320517 |
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| End bp | 5322286 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640935313 |
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| Product | phospholipid/glycerol acyltransferase |
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| Protein accession | YP_001476073 |
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| Protein GI | 157377473 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0523485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACTGA GCAGGCGCTT TTTTCCCTAC TTTGTTACTC AGTGCCTTGG CGCGCTGAAC
GACAATGTCT ATAAAAATGT TTTACTCCTG TTCGTCACTT ATTCTCAAGT CGATAGCCTG
CCTATAGGGG TCAATCTTTT TGTCAATTTA GCCGCAGGTT TGTTTATATT GCCGTTTTTT
CTGTTCTCAG CCCATGCGGG ATTGATTGCG GATAATATCG ATAAGGCTCT GCTGATCAGG
CGCCTTAAAC TGTTAGAAGT TATCATCATG CTTTGCGCCG CCGTGGCAAT ACTCACCCAA
AGCTACCTGT CGATGTTGTT ACTGCTCTTT TTGACCGGTG TTCAATCCGC CTATTTTGGA
CCGGTCAAAT ACTCCCTTCT GCCTCAGGTG CTTAAAGATA AAGAGTTGGT CACGGGCAAC
GCTTGGGTTG AAATGGGGAC CTTTATCTCC ATTCTCACGG GAACGATCAC CGCAGGTTTC
ATTGTGGCAA GCGACAACCC TAAGTTTTTC GCGGCCTTGT CGGTTTGTTT TCTGGCCCTG
TCAGGCTATC TTTCTAGCCG ACTCATTCCG GCGATACCGT TAAAGCGGGA ACCTAAGAAG
CTGCGTTTTG CTCCTTTCTC TGGCGCTATC AATAGCATCA GAAAAGTGCA ACGCACTCCC
TCTATATGGA TGGCTGTTCT GGCTATCAGT TGGTTCTGGT TTCTTGGGGC GACCTATCTG
ACACAGTTTC CCAACTTTGC CAAAACACAC CTGCACTCCG GCGCTACTGT CGTATCTCTG
TTGTTAGCCC TCTTCTCTAT CGGAATTGCG GTTGGATCTT TTATGTGTGA GCGGCTCTCA
TTCAGACAGG TTGAAATGGG ACTCTTGCCC TTTGGCTTAC TGGGGTTAGC CCTTTTCGGT
GTCGACCTTT ATTGGGCCAT TCCAGGTGGT TCATGGGAGC AAGACCAGAT TTATACCGCT
CTCTCCTTCC TCTATGAGTC GAAGCATTAT CGATTGATGT TTGATCTCTT TATGGTGGGA
GTCAGCGGAG GGGTCTTCAT TGTCCCCCTA TACGCATTCA TTCAAGCCAG AACAAAAGAG
GGGGAGTGTG CTCAGGCCAT AGCGGCGAAT AATATTTTAA ATGCGCTGTT TATGGTGGTT
TCGGCTGCTA GTTCAATGAT TATTCTTGGG GTATTGAACT GGAGCATTGC TGAGTTGTTT
CTGTTACTCG CTATCACGAA TTTAGCCGTC GGGCTCTATC TTTATGCAAA GCAGCCCGAG
CTTGGAGCAA GATTTATCGC TTACCTGCAC TCTCGGATTT TTCATTCGGT AACTGTGATA
GATAGAGACT TGATTCCTAA AACAGAAGCG GCCTTGCTCA TAGGTTCTCC CTGTACGGCT
AAGGAGTTGT TCTTGCTGCA ACACCTGTCT ATAAGAACGG TTCGTATTAT GGTGAAAGGT
ACTTTGAGGC AAGACTTATG GTCCGGACTG CTGAGATGGA GTGGGATGGC TGTAGAATTT
ACCTTACCCA AAAACAAGGG GGCAGATGAA ACTTGTAAAC ATCATTTCAA AGACCGGGAG
GAGATGCTAA ATCAAATTGA ATTTGCACTG TCTGACAACG AGTTAGTGTA TCTTTCAAAG
GAAGACTATT TACTCTTAGC CGATGAGTTT TGTGCGAGAT TGGCCGCCTT CCCTAAGCGC
TATATCAGTA TTAACAGTTC AGAAGCATCG AAGTCAGGGG ACAGAGGGCG AAGTGGGGAT
ACAAGCCTTA TCGTTACTTT GGACCGTTAA
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| Protein sequence | MVLSRRFFPY FVTQCLGALN DNVYKNVLLL FVTYSQVDSL PIGVNLFVNL AAGLFILPFF
LFSAHAGLIA DNIDKALLIR RLKLLEVIIM LCAAVAILTQ SYLSMLLLLF LTGVQSAYFG
PVKYSLLPQV LKDKELVTGN AWVEMGTFIS ILTGTITAGF IVASDNPKFF AALSVCFLAL
SGYLSSRLIP AIPLKREPKK LRFAPFSGAI NSIRKVQRTP SIWMAVLAIS WFWFLGATYL
TQFPNFAKTH LHSGATVVSL LLALFSIGIA VGSFMCERLS FRQVEMGLLP FGLLGLALFG
VDLYWAIPGG SWEQDQIYTA LSFLYESKHY RLMFDLFMVG VSGGVFIVPL YAFIQARTKE
GECAQAIAAN NILNALFMVV SAASSMIILG VLNWSIAELF LLLAITNLAV GLYLYAKQPE
LGARFIAYLH SRIFHSVTVI DRDLIPKTEA ALLIGSPCTA KELFLLQHLS IRTVRIMVKG
TLRQDLWSGL LRWSGMAVEF TLPKNKGADE TCKHHFKDRE EMLNQIEFAL SDNELVYLSK
EDYLLLADEF CARLAAFPKR YISINSSEAS KSGDRGRSGD TSLIVTLDR
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