| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4341 |
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| Symbol | |
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| ID | 5611720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5318306 |
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| End bp | 5319346 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640935311 |
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| Product | selenophosphate synthetase |
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| Protein accession | YP_001476071 |
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| Protein GI | 157377471 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0709] Selenophosphate synthase |
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| TIGRFAM ID | [TIGR00476] selenium donor protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00762353 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000113499 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAGAAT CAGAAATAAA GCTTACCGAA TACAGTCACG GAGCAGGATG TGGCTGTAAA
ATATCTCCAA AAGTCCTCAG TACCATTTTA GCCTCTCAGC TTCCTGTATT CGAAGATCCG
AACATACTCG TTGGTAATCA AACCAGAGAT GACGCAGCCG TTTATAAGCT CAACGATGAG
ACCGGAATCA TAAGCACCAC CGACTTCTTT ATGCCGATAG TCGATGATCC TTTTACCTTT
GGCCGCATCG CGGCGACCAA TGCTATCAGC GATATCTACG CCATGGGCGG CACCCCAATG
ATGGCAATTG CTATCTTGGG CTGGCCAGTC AATAAATTAT CACCCGAGGT GGCACAGCAA
GTTGTTGATG GTGGACGTCA AGCCTGCGCC GATGCGGGAA TCATGTTAGC GGGAGGGCAC
AGTATCGATT CCCCCGAGCC CATATTCGGA CTCGCAGTGT CGGGGCAAAT TCCCCTGTCT
GAGCTAAAAC AGAATAATAC GGCTCAACCC GGTGACAAAC TCTACATCAC CAAACCACTG
GGCATTGGCA TATTAACGAC GGCACAAAAG CAGAAGAAGA TAGCCCCGGA AGATACGAAT
ATTGCCGCCG ACGCTATGTG CCAACTCAAT ATTTTAGGTC CTATCATAGC TAAAATATCC
GGCGTAAATG CCATGACCGA TGTGACAGGT TTCGGACTCG CGGGACATCT GATTGAGATG
TGTCAGGGCG CTGGCTTAAA CTCACAAATT CAAGTGTCTG CGCTTCCATT ACTGCCTAAA
GCTGAACAGT ACCTTGAAAT GGGATGTATC CCTGGCGGCA CACATCGAAA CTTCGACAGC
TATAGTGAGC ATCTACCAAT GCTCAGTGAC AAACAGAAAG CCATTATCTG CGATCCTCAA
ACCAGTGGTG GCTTACTGAT CTCAGTCTCC GCCGAAGCCG AAAGCGAACT TGTCGAGCTA
CTCACTAAGC ATAAAGTCCC ATCCAGCTGT ATCGGGAGTC TTAACAGTTT TAACCAGCTG
ACATTAGTGG AGCTCCTCTA A
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| Protein sequence | MSESEIKLTE YSHGAGCGCK ISPKVLSTIL ASQLPVFEDP NILVGNQTRD DAAVYKLNDE
TGIISTTDFF MPIVDDPFTF GRIAATNAIS DIYAMGGTPM MAIAILGWPV NKLSPEVAQQ
VVDGGRQACA DAGIMLAGGH SIDSPEPIFG LAVSGQIPLS ELKQNNTAQP GDKLYITKPL
GIGILTTAQK QKKIAPEDTN IAADAMCQLN ILGPIIAKIS GVNAMTDVTG FGLAGHLIEM
CQGAGLNSQI QVSALPLLPK AEQYLEMGCI PGGTHRNFDS YSEHLPMLSD KQKAIICDPQ
TSGGLLISVS AEAESELVEL LTKHKVPSSC IGSLNSFNQL TLVELL
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