| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4340 |
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| Symbol | |
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| ID | 5613667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5316987 |
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| End bp | 5318105 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640935310 |
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| Product | stearoyl-CoA 9-desaturase |
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| Protein accession | YP_001476070 |
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| Protein GI | 157377470 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1398] Fatty-acid desaturase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000789253 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000100188 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATACAC CACCGTTAAT TTGGACCAAT GTGCTGCTAT TTGCCATCAC ATTTCTTGGT
GCCGCGATCT TTGTCCCTTG GTATGGGATC CTACAGGGCT ATGGCTTAAT TGAATGGCTA
GCCTTTATTG GTTTTGCTTT TGCCAGTGGC CTATCTATTA CCGCCGGATA CCATAGACTC
TGGTCACACA AAACGTATAA AGCCAGTTCA TCTGTACGCT TTATCTTTGC CTTGGGGGGG
GCATTAGCAT TGCAAAATAG TGCCCTTCAT TGGTCTTCCG ATCATCGTGT TCACCACAAA
CATGTCGATA ACAATGACAA AGATCCCTAT TCAGCCAAAA TGGGATTTTG GTATAGCCAC
ATAGGTTGGA TGTTAAGAGA GTACCAAGCA CAGCGTTATC ACGATTATAA AAATGTTCGT
GACTTACAAA ATGACAAGAT TGTCATGTGG CAGCACAAAT ACTACTTAGC ATTAGTGCTT
CTGATGAATA TTGCTCTGCC CGCATTTCTT GGCTGGCTCA ACGGTGACAT ACTGGGCATG
CTCCTGATGG CGGGTTTGTT AAGGCTCGTT GTCGTTCATC ACTGTACATT CTTCATTAAT
TCACTGGCGC ATGTCTGGGG AAGTCAGCCC TACACAGATA AAAATACCGC CAGAGATAAC
GGGATCATTG CCCTTCTCAC CTATGGCGAG GGCTACCATA ACTTTCATCA TATCTTTGAA
AATGATTATC GAAATGGCAT TAAGTGGTGG CAATACGATC CAACCAAATG GCTTATCAAT
TTGCTTAACT GGCTGGGTTT AGCAAAAGAT CTACGTGTCA CACCTCAAGA GAGAGTTGAG
AGCGCCATGT TACAGATGCA ACTTAAGCGA ACTCAGCGTC GAGTTGCAAA TCTAACTAAC
TGCGATGAGG CGTTAGAAAA GCTTCAGGCT GAATATGAGC TGTTAAAGTC GCACCTGGCA
GATTATTACA AGGCGAAGAA AGAGCTTTTG GAAGCGAAGC GCAAACAACT GGCCAGCAAG
CAACTGATGT TGCAGGTTGA GGAGATGAAG CAACGTTTCC TTGCCCAGCA AAAGAACTGG
CAAATGCTGA CGTCGACTTA CGCGCAGCCA ATAAAATAG
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| Protein sequence | MNTPPLIWTN VLLFAITFLG AAIFVPWYGI LQGYGLIEWL AFIGFAFASG LSITAGYHRL
WSHKTYKASS SVRFIFALGG ALALQNSALH WSSDHRVHHK HVDNNDKDPY SAKMGFWYSH
IGWMLREYQA QRYHDYKNVR DLQNDKIVMW QHKYYLALVL LMNIALPAFL GWLNGDILGM
LLMAGLLRLV VVHHCTFFIN SLAHVWGSQP YTDKNTARDN GIIALLTYGE GYHNFHHIFE
NDYRNGIKWW QYDPTKWLIN LLNWLGLAKD LRVTPQERVE SAMLQMQLKR TQRRVANLTN
CDEALEKLQA EYELLKSHLA DYYKAKKELL EAKRKQLASK QLMLQVEEMK QRFLAQQKNW
QMLTSTYAQP IK
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