| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4339 |
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| Symbol | |
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| ID | 5613666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5316217 |
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| End bp | 5316834 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640935309 |
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| Product | DNA-binding transcriptional repressor FabR |
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| Protein accession | YP_001476069 |
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| Protein GI | 157377469 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000022912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000127177 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATGGGTA TAAGAGCACA GCAGAAAGAG AAGACACGTC GGGCACTCGT CGATGCGGCG
TTTAATCAAT TAAATGCTGA GCGTAGTTTC TCTAGTCTGA GTTTGCGTGA AGTTGCGAGA
GAAGCCAAAA TTGCACCTAC CTCGTTTTAT CGTCATTTCA AAGATATGAA TGAACTTGGA
CTTACCATGG TCGATGAGGG GGGCTTAACT CTCAGGCAGC TGATGCGTAA AGGGCGACAG
CGAGCCGAAG CTGGAGGAAG TGTTATCCGA ATATCTGTCG AAACCTTTAT GGAGGTATTA
GAATCAAACC CCAACGTGTT TCGGATTCTA TTACACGAAC GTTCGGGGAC GTCGGCACCA
TTTCGTGCAG CGGTGGCTCG TGAAATCGAG CATTTTATCT CTGAGTTGAC TCATTATACC
GAAGCGACAG CAAAACGAAG CCCGGAATTA GCAAGGGCTC AGGCTGAGGC TCTGGTGACA
CTGGTTTTTA ACGCGGGGGC TGCTGCATTA GATATGAAGC GGGTAGATAG GAAGGTACTT
GCAGACCGGT TGGTGATACA GCTACGTATG GTGGCTAAAG GTTCCGAGGT GTTGCAACAA
AAGATGGATA ATAAGTAG
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| Protein sequence | MMGIRAQQKE KTRRALVDAA FNQLNAERSF SSLSLREVAR EAKIAPTSFY RHFKDMNELG
LTMVDEGGLT LRQLMRKGRQ RAEAGGSVIR ISVETFMEVL ESNPNVFRIL LHERSGTSAP
FRAAVAREIE HFISELTHYT EATAKRSPEL ARAQAEALVT LVFNAGAAAL DMKRVDRKVL
ADRLVIQLRM VAKGSEVLQQ KMDNK
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