| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4336 |
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| Symbol | |
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| ID | 5610211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5313552 |
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| End bp | 5314019 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640935306 |
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| Product | RNP-1-like RNA-binding protein |
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| Protein accession | YP_001476066 |
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| Protein GI | 157377466 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000106713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000013394 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCAAAAGC CATTTCTTAT CGTTTTGATT ATCGCCATAG TTGGCGCATT CGCGTTCAAC
CAGTTCGCAG GCCTTAATGC CGCAATCGCT TTTTTCACAG GTGCTATTAT TGCAAGTGTT
GTATTCGCAC TTCAGGGTAA ATCATCTCCA TCCGCTAACA ATGCCGAGAG CGTTGAGCAA
TATACCGGCC CAACAATGAC ACTATACGTA GGTAACTTGC CTTATCGTGT ACATGAAGGT
GAAGTAAAGG AGTTGTTCGG TAAATACGGT CCGGTAAATT CTGTGCGTTT GGTTCGTGAC
CGCAAGACAG GCCGACGTAA AGGTTTTGGA TTTATTGAAA TGTCAGAGGC TGGCGCTAAG
AAAGCCATGT CTAAATTAAA TGAATTCGAT TTCCAGGAAC GTACACTAAA AGTAAGAGAA
GCAAAATCTC AAGATGCAGA CAAGAGCGAG AGTCAAGCTA ACACTTAA
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| Protein sequence | MQKPFLIVLI IAIVGAFAFN QFAGLNAAIA FFTGAIIASV VFALQGKSSP SANNAESVEQ
YTGPTMTLYV GNLPYRVHEG EVKELFGKYG PVNSVRLVRD RKTGRRKGFG FIEMSEAGAK
KAMSKLNEFD FQERTLKVRE AKSQDADKSE SQANT
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