| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4335 |
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| Symbol | murB |
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| ID | 5610496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5305767 |
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| End bp | 5306801 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640935299 |
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| Product | UDP-N-acetylenolpyruvoylglucosamine reductase |
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| Protein accession | YP_001476065 |
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| Protein GI | 157377465 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0812] UDP-N-acetylmuramate dehydrogenase |
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| TIGRFAM ID | [TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000219942 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCAGTTA AACCTAATTA CTCGTTAAAA CCCTATAATA CGTTCGGTGT CGACTACGCC
TGTAGTGAAT TGATATCGGT AGAGACGAAA AGTGAACTAA TAAGAATATG CTCAAAGCTT
TTTGCCGAGG ATAAGCCTTA TTTGGTATTG GGTGGCGGCA GTAATATTTT GTTAACTGAA
AACTATCTGG GTACCGTTGT TCAGGTTTGT TCGAAAGGAA TCGTGTGTCA TGAAGATGAC
GAGTTTTACT ATCTAAGTGT GGAAGCCGGT GAAGAGTGGC ATCAATTAGT TGAGTACTGT
TTAGCTACAG CGATGCCAGG GCTCGAAAAT CTGGCATTGA TCCCTGGGAC AGTCGGGGCA
GCTCCAATTC AAAATATCGG TGCTTATGGA GTCGAATTTA TGGATGTCTG CGACTGGGTT
GAATTTCTCG ATCTTCGTGA TGGTGCATTA ACACGTTATA AGCAGGAAGA GTGTCAGTTT
GGTTATCGTG AATCCATTTT TAAGGGGGCT TTAAAGGGGA TTTCAGTTAT CACAGGTGTC
GGAATTAAGT TAGCCAAAAA ATGGCGACCT AACCTGTCAT ATGGTCCTCT AAAGCGCTTT
GAAAACACAG GTGTTACCCC TAAGGAGATC TTTGACTGTA TCTGCAGTAC CCGTAATGAA
AAACTTCCCG ATCCAAGGCT GATAGGAAAT GCAGGTAGTT TTTTTAAAAA CCCCATTATC
TCGTTTTCGA AATTCCAAGA GTTGATTGGA AAACACCCGT CGCTTGTTGG TTATCCTTTG
CCTGATGGTT TTGTCAAATT AGCGGCAGGC TGGTTAATTG ATAATGCCGG CTTAAAGGGG
GCATCTGTTG GTGATGCGGC TGTTCATGAG CAACAAGCTT TGGTATTAAT TAATCGAGGG
CAGGCTAGCG GTAAAGATAT TCTTAAGCTC GCATTAAAAG TTATAGAGAC AATTAAAATA
CAATTTGGTG TGACTCTAGA AGCCGAACCT AGAGTCATAG GAGCTTATGG AGAAAAGGAG
TTAATTGATG ATTGA
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| Protein sequence | MSVKPNYSLK PYNTFGVDYA CSELISVETK SELIRICSKL FAEDKPYLVL GGGSNILLTE
NYLGTVVQVC SKGIVCHEDD EFYYLSVEAG EEWHQLVEYC LATAMPGLEN LALIPGTVGA
APIQNIGAYG VEFMDVCDWV EFLDLRDGAL TRYKQEECQF GYRESIFKGA LKGISVITGV
GIKLAKKWRP NLSYGPLKRF ENTGVTPKEI FDCICSTRNE KLPDPRLIGN AGSFFKNPII
SFSKFQELIG KHPSLVGYPL PDGFVKLAAG WLIDNAGLKG ASVGDAAVHE QQALVLINRG
QASGKDILKL ALKVIETIKI QFGVTLEAEP RVIGAYGEKE LIDD
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