| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4330 |
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| Symbol | secE |
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| ID | 5610389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5301329 |
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| End bp | 5301700 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640935293 |
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| Product | preprotein translocase subunit SecE |
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| Protein accession | YP_001476062 |
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| Protein GI | 157377462 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0690] Preprotein translocase subunit SecE |
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| TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000313064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000188244 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACAACAA ATACTGAAAG CCAGGGTAAC TCTCTGGATA TTGTAAAGTG GGCCCTAGTC
GTTATCTTAT TGGCTGCCGC CATTATCGGC AATCAGATGT ATAGCGAAAC CAGTGTGTTG
GTTCGTGCAA TAGGTGTAGT AGTAGCTTTC GTTATTGCAG GATTTATTGC GCTTCAAACT
GAGAAAGGTA AGCAAGCGCT TGCTTTTGCT CGTGAAGCAC AAATTGAAGT ACGTAAGGTA
GTTTGGCCTA CGCGTCAAGA AGCGCTTAAT ACAACATTTA TTGTATTAGC CGCGACCGGT
ATTCTTGCGT TGATCCTTTG GGGTATGGAC GCAGTATTGC TGAGAATTGT CAATTTTATT
ACAGGCGTAT AG
|
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| Protein sequence | MTTNTESQGN SLDIVKWALV VILLAAAIIG NQMYSETSVL VRAIGVVVAF VIAGFIALQT
EKGKQALAFA REAQIEVRKV VWPTRQEALN TTFIVLAATG ILALILWGMD AVLLRIVNFI
TGV
|
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