| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4325 |
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| Symbol | rplL |
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| ID | 5609807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5298329 |
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| End bp | 5298697 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640935288 |
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| Product | 50S ribosomal protein L7/L12 |
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| Protein accession | YP_001476057 |
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| Protein GI | 157377457 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0222] Ribosomal protein L7/L12 |
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| TIGRFAM ID | [TIGR00855] ribosomal protein L7/L12 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000520258 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000726693 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGTCTATCA CTAAAGACGA TATCTTAAAC GCTGTTGCAG AAATGTCTGT AATGGAAGTT
GTTGCACTAA TCGAAGCAAT GGAAGAGAAG TTCGGCGTAT CTGCCGCTGC TGCTGTTGTT
GCTGGCGGTG CTGAAGGCGG TGCTGCTGCT GCTGAGCAAA CTGAATTTGA CGTCATGATG
ACTTCATTCG GTGAGAACAA AGTTAAAGTA ATTAAAGCTC TTCGTGGCGC TACAGGTCTT
GGCCTGAAAG AAGCTAAAGC TATGGCTGAA TCTGCTCCAG TAGCAGTTAA AGAAGCTATC
ACTAAAGAAG AAGCTGAAGC TCTTAAGACT GACCTTGAAG AAGCTGGTGC TTCTGTAGAG
ATCAAGTAA
|
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| Protein sequence | MSITKDDILN AVAEMSVMEV VALIEAMEEK FGVSAAAAVV AGGAEGGAAA AEQTEFDVMM
TSFGENKVKV IKALRGATGL GLKEAKAMAE SAPVAVKEAI TKEEAEALKT DLEEAGASVE
IK
|
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