Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4313 |
Symbol | rpsS |
ID | 5609840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 5281815 |
End bp | 5282093 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640935276 |
Product | 30S ribosomal protein S19 |
Protein accession | YP_001476045 |
Protein GI | 157377445 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0185] Ribosomal protein S19 |
TIGRFAM ID | [TIGR01050] ribosomal protein S19, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000152177 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000439739 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCCACGTT CTCTCAAGAA AGGTCCATTC ATTGACCTGC ACTTGCTGAA GAAGGTAGAG AAAGCGATGG AAGCGGGAGA CAAGAAGCCT ATTAAGACTT GGTCTCGTCG CTCTATGATC ATCCCTAATA TGATTGGGTT GACCATCGCT GTCCATAATG GTCGTCAGCA CGTACCTGTG TTCGTAACTG ACGAAATGAT CGGCCACAAG CTTGGTGAGT TTTCACCAAC TCGCACTTAT CGCGGCCATG CTGCTGATAA GAAAGCGAAG AAGCGTTAA
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Protein sequence | MPRSLKKGPF IDLHLLKKVE KAMEAGDKKP IKTWSRRSMI IPNMIGLTIA VHNGRQHVPV FVTDEMIGHK LGEFSPTRTY RGHAADKKAK KR
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