| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4301 |
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| Symbol | rplR |
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| ID | 5611504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5276850 |
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| End bp | 5277200 |
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| Gene Length | 351 bp |
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| Protein Length | 116 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640935264 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_001476033 |
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| Protein GI | 157377433 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000135835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000592132 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGATAAGA AAACATCTCG CTTACGCCGC GCAACTCGCG CGCGTAAGAA GATCCAAGAG
CTGGGCGTTA ACCGTCTGGT TGTACATCGT ACACCACGTC ACACCTATGC TCAGGTAATA
AGCCCTGATT CACAGGTTTT GGCGGCAGCT TCTACTGCTG AGAAAGCGGT AACAGAGCAA
CTTAAGTACA CAGGTAACGT TGATGCAGCT AAAGCAGTGG GTAAAACCGT TGCTGAGCGT
GCTATCGAAA AAGGCGTGAC TGTAGTTGCA TTCGATCGTT CCGGTTTCAA GTATCACGGA
CGTGTAGCTG CATTAGCAGA CGCCGCTCGT GAAGCTGGCC TCAAGTTCTA A
|
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| Protein sequence | MDKKTSRLRR ATRARKKIQE LGVNRLVVHR TPRHTYAQVI SPDSQVLAAA STAEKAVTEQ
LKYTGNVDAA KAVGKTVAER AIEKGVTVVA FDRSGFKYHG RVAALADAAR EAGLKF
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