| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4297 |
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| Symbol | rpsM |
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| ID | 5612772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5273749 |
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| End bp | 5274105 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640935260 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_001476029 |
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| Protein GI | 157377429 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000201851 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000355605 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | GTGGCCCGTA TCGCTGGCAT TAACATTCCT GATCAGAAGC ATACAGTCAT TGCATTGACT
GGAATCTTCG GTATCGGTCG TACTCGCGCT AGAGCAATCT GCGCGACTAC TTCTATTGCT
GAAGACGCTA AGATCAAGGA ATTGAGCGAA GCTCAAATTG ATACACTACG CGAAGCAGTT
GCCGAATACA CTGTAGAAGG TGATTTGCGT CGTGAAGTTT CCATGAACAT CAAGCGTCTT
ATGGACCTTG GCTGTTACCG TGGAATACGT CACCGTCGTA GCCTGCCTCT TCGTGGGCAA
CGTACTAAGA CCAATGCGCG TACGCGTAAA GGTCCACGTA AACCAATCAG AAAGTAA
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| Protein sequence | MARIAGINIP DQKHTVIALT GIFGIGRTRA RAICATTSIA EDAKIKELSE AQIDTLREAV
AEYTVEGDLR REVSMNIKRL MDLGCYRGIR HRRSLPLRGQ RTKTNARTRK GPRKPIRK
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