| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4296 |
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| Symbol | |
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| ID | 5613996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5273342 |
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| End bp | 5273734 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640935259 |
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| Product | 30S ribosomal protein S11 |
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| Protein accession | YP_001476028 |
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| Protein GI | 157377428 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0100] Ribosomal protein S11 |
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| TIGRFAM ID | [TIGR03632] 30S ribosomal protein S11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000132773 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000385388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGCTAAAG TTCCGTCACG TTCTCCGCGT AAGCGTGTAC GTAAACAGGT TGCTGATGGC
ATGGCGCATA TCCATGCGTC TTTCAACAAC ACAATTATTA CCATTACTGA CCGTCAAGGT
AATGCACTAT CTTGGGCAAC TTCAGGTGGT TCAGGTTTCC GTGGTTCACG TAAATCTACC
CCTTTTGCTG CACAGGTTGC TGCTGAGCGT GCAGGTGTTG CTGCTCAGGA CTACGGTGTT
AAAAACCTTG AAGTATTTGT AAAGGGTCCA GGTCCAGGGC GTGAATCAGC GATTCGTGCA
CTAAACTCGG TTGGTTATAA GATAACTAAC ATTACCGATG TGACGCCTAT CCCTCATAAT
GGTTGTCGTC CTCCTAAGAA ACGTCGCGTA TAA
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| Protein sequence | MAKVPSRSPR KRVRKQVADG MAHIHASFNN TIITITDRQG NALSWATSGG SGFRGSRKST
PFAAQVAAER AGVAAQDYGV KNLEVFVKGP GPGRESAIRA LNSVGYKITN ITDVTPIPHN
GCRPPKKRRV
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