| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4292 |
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| Symbol | |
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| ID | 5613511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5270108 |
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| End bp | 5271148 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640935255 |
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| Product | hypothetical protein |
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| Protein accession | YP_001476024 |
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| Protein GI | 157377424 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000159214 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTGACT TTCGGTACCG TAACACCTGG TCTATAACTA TAGAAAGCCC TTTGAAGACC
GAGAATATGC GGTATCTCTT ATTCCTACTG ATTATCATGC CACTGAAATT GATGGCAGCA
TCAGTGTTGA TCATTGAAAG CTATCATCAG GAGTACGAGT GGGATAAGAA CTACAATAAG
GGCATAGTTT CAATTCTTGG TAATGAACAC GATTACCACC ACTTTTATCT GGATACAAAA
AGACTTCCCC AACCATTGTT TATTGCCAGG GCTGAAAGCG CCTGGGAGGC GTTTGAGAAG
CTTAAGCCTG ATCTTGTAGT ACTGGCAGAT GATAATGCCA TAAAGTTGCT GCATAAGCGC
TTTGTGAATA CAGAGATGCC GGTCGTATTC CTTGGTCTCA ACACAAACCC CAGAACCTAT
AACATACATA ACCAGAAAAA TTTTACCGGC GTACTTGAAA GACCACTGTT CAAAAGATCA
CTCCTCTTGG CAAACCAGTT GCTGATAGAA AAAACAGATA AAAGGTTTAT GGTACTTTTC
GATAATAGCA AAACTTCAAT TGCATCTCTC GAGCAGATCA CTCCATCTCT GGACAGTATA
AAAATGGGAA AAGTGAGTCT GGATTTCGTA CTGACAAGTA ACTTCAGTGC GTGGAAAACA
TGTATCTCTG AAGCCAAAGA GAAAGGATAT GATGCCATAT TTATCGGCCT TTACCATACG
ATACGTGATA GTTCAGGAAA CCACGTGTCG CCCGAGCAAG TCATAGCCTG GACCAGAGAA
CATTCCCCAT TACCACACTT TGGATTTTGG GAGTTTACTA TAGGGCCGGA CAAAAATATT
GGTGGCTACG TATTAGATGC TTACCTTCAT GGTCAGCATG CAGGTAGGCT AATGAAGCAG
ATTTTAGAAG GCTCTTCTCC CGATTCACTT TCGTTAGTTT TTGATAGGAA GGGTCTATAC
CTGTTCAGCA AGAGCGGTAT AGAGCGATGG GAACTTAAAG TTCCAGACAA TATCTCGAAA
AATGCAAAGT GGATTGATTA A
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| Protein sequence | MPDFRYRNTW SITIESPLKT ENMRYLLFLL IIMPLKLMAA SVLIIESYHQ EYEWDKNYNK
GIVSILGNEH DYHHFYLDTK RLPQPLFIAR AESAWEAFEK LKPDLVVLAD DNAIKLLHKR
FVNTEMPVVF LGLNTNPRTY NIHNQKNFTG VLERPLFKRS LLLANQLLIE KTDKRFMVLF
DNSKTSIASL EQITPSLDSI KMGKVSLDFV LTSNFSAWKT CISEAKEKGY DAIFIGLYHT
IRDSSGNHVS PEQVIAWTRE HSPLPHFGFW EFTIGPDKNI GGYVLDAYLH GQHAGRLMKQ
ILEGSSPDSL SLVFDRKGLY LFSKSGIERW ELKVPDNISK NAKWID
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