| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4291 |
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| Symbol | |
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| ID | 5613510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5269553 |
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| End bp | 5270038 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640935254 |
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| Product | cytochrome c-type biogenesis protein CcmE |
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| Protein accession | YP_001476023 |
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| Protein GI | 157377423 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2332] Cytochrome c-type biogenesis protein CcmE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000100265 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAACGCTA GACGTAAAAA AAGATTAACA TTAGCAGTAG CCTTAATTGG CGGGGTGGCC
GCGATTGCGT CACTCTTACT GTACGCCCTC AACTCAAACC TGAATTTGTT TTACACTCCA
ACCGAGATTG TTCAGGGTAA GAAGGATACC GGTGTTTTGC CTGAAGTAGG TCAACGCATA
CGTGTCGGTG GCATGGTTAC CATCGGCTCG ATGGTCCGCG ATCCTGATAG TTTACACGTA
GAGTTTGCAG TTCACGATGC TGCCGGCGGT GAAATTCTGG TTACTTACGA TGATCTGCTG
CCGGATCTGT TCAGAGAAGG CCAAGGTATC GTTGCTCAAG GTGTTTTAAT TGAAGGCGGT
AAGCTTCAGG CGACTGAAGT TTTAGCAAAA CATGATGAAA ACTACATGCC TCCAGAGGTA
GCTGAAGCCA TGGGACAGAC TCATGAGAAG CTGGATTACA ACGAACAGCA AAAAACTAGT
TACTAA
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| Protein sequence | MNARRKKRLT LAVALIGGVA AIASLLLYAL NSNLNLFYTP TEIVQGKKDT GVLPEVGQRI
RVGGMVTIGS MVRDPDSLHV EFAVHDAAGG EILVTYDDLL PDLFREGQGI VAQGVLIEGG
KLQATEVLAK HDENYMPPEV AEAMGQTHEK LDYNEQQKTS Y
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