| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4281 |
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| Symbol | |
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| ID | 5609757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5261231 |
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| End bp | 5261809 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640935244 |
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| Product | redoxin domain-containing protein |
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| Protein accession | YP_001476013 |
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| Protein GI | 157377413 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000444464 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0383421 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAC GGTTAGCTAG TGTGCTAACG GTTTCACTGT TGGCACTAGG TTCGTTATCT
GTAAGCACAG CATTTGCGTA TCCTGGTATG CAAAAAAAAG CAGAAGCTGC GAGTCAGTCC
AGTATTGACC TTATTAATGT ATTGCCAAAA ACGTATCCTA TCGACGTCGT TCCCTTTAAA
GATAGCAAAG GTGATGCGGT AGATTTTAGT CAATATAAGG GTAAGGTGAT CATGGTCAAT
ATGTGGGCGA CTTGGTGCCC ACCTTGCGTT CGTGAACTGC CAGCGATTGA ACGTTTATCT
ACTAAGTTCG ATTCCAAAGA CTTTGAAATT TTACCTATCT CAATCGATCT TGAAGGTAAA
GATAAGGTTG AACCATTTTT GAAAGAGCTA GGAATGGAAG CGTTTAATTC TTACTATGAT
GAAAAGCAAA AGTTAGGTCG TGTTTTTCCA CTAGACACGA TTCCAGCCAC TTTCATCTTG
AACAAAGAAG GTGAACTGTT GGCCTTTGTG CGCACTTTTG TCGATTGGGA TGACAAAAAA
GCCGAAGAGC TGATACAAAG TTTTATAGAT AAGCCTTAA
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| Protein sequence | MKKRLASVLT VSLLALGSLS VSTAFAYPGM QKKAEAASQS SIDLINVLPK TYPIDVVPFK
DSKGDAVDFS QYKGKVIMVN MWATWCPPCV RELPAIERLS TKFDSKDFEI LPISIDLEGK
DKVEPFLKEL GMEAFNSYYD EKQKLGRVFP LDTIPATFIL NKEGELLAFV RTFVDWDDKK
AEELIQSFID KP
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