| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4276 |
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| Symbol | argC |
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| ID | 5611967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5247887 |
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| End bp | 5248867 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640935236 |
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| Product | N-acetyl-gamma-glutamyl-phosphate reductase |
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| Protein accession | YP_001476008 |
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| Protein GI | 157377408 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0002] Acetylglutamate semialdehyde dehydrogenase |
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| TIGRFAM ID | [TIGR01850] N-acetyl-gamma-glutamyl-phosphate reductase, common form |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000196379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.31799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAGCA TTGCTATCAT TGGCGCCAGT GGATACACGG GCGCACAAAT TACCTCTCTC
ATTAATGCCG ATGAAAACTT GATGATTCAA GGCTTGTATG TTTCGGAAAA TAGTTTAGAT
AAAGGTAAGC CTTTGTCAGA CTTATACCCA AGCTACAGTC ATATTTCACT CTCTCTTTCT
CCTCTCTGTG ATGACGCAAA AATGCTCATT GTTGAGCAGG CCGATGCGGT GGTTCTTGCA
ACCGACCATG CCGTGAGCTT GCATCTGGCT GCATGGTTCT ATCAAAAGGG CTTAACCGTA
TTTGATCTTA GTGGCGCATA TCGTTTTTCA GATGTAGAAC AATATCCTAA ATGGTATGGC
TTTAATCATG AATATCAAGA TGTTCTCTCA GATGCTGTCT ATGGATTAGC CGAGTGGAAT
AGTGAGCAAA TCGCTAGTAG TAAGATGATT GCTGTTCCCG GCTGTTATCC AACAGCATCT
CTAACGGCAC TGAAACCTAT TGGCATGTTT TTAACCGATG CATTTCCGGT TATTAATGCC
GTCAGTGGTG TGACTGGTGC CGGCAGAAAA GCGCAGCTAC ATACCAGTTT TTGTGAAGTC
AGCTTGACTC CCTATGGTGT GCTGGGTCAT AGGCATCAAC CTGAGATTGC CACTCAGCTG
GGACAAGAGG TCATATTTAC TCCTCATCTT GGCAACTTTA AGCGTGGAAT TTTGGCGACG
ATCACGGTGC AGTTAAAACC AGAAAGCACC GAAGCCGATG TCGCAGCAGC ATATGCTGTT
TATGATGATG CTCCACTCAT TACGGTCAAG CAAAACCAAT TCCCTAAGGT CGATGACGTC
GTTAACACTC CAAACTGCCA CCTGGGGTGG AAGTTCGATC CAGAGACTCA CTATCTCGTT
GTCGCGAGTG CGATTGATAA CTTGATGAAG GGAGCCGCAA GCCAAGCTCA TCAATGCATA
AGGATTCACT TTAATTATTA A
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| Protein sequence | MKSIAIIGAS GYTGAQITSL INADENLMIQ GLYVSENSLD KGKPLSDLYP SYSHISLSLS
PLCDDAKMLI VEQADAVVLA TDHAVSLHLA AWFYQKGLTV FDLSGAYRFS DVEQYPKWYG
FNHEYQDVLS DAVYGLAEWN SEQIASSKMI AVPGCYPTAS LTALKPIGMF LTDAFPVINA
VSGVTGAGRK AQLHTSFCEV SLTPYGVLGH RHQPEIATQL GQEVIFTPHL GNFKRGILAT
ITVQLKPEST EADVAAAYAV YDDAPLITVK QNQFPKVDDV VNTPNCHLGW KFDPETHYLV
VASAIDNLMK GAASQAHQCI RIHFNY
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