| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4274 |
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| Symbol | |
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| ID | 5611965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5246048 |
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| End bp | 5246956 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640935234 |
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| Product | ornithine carbamoyltransferase |
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| Protein accession | YP_001476006 |
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| Protein GI | 157377406 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0078] Ornithine carbamoyltransferase |
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| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0242541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.315958 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCATC TACTATCGAT AAAGGACTTA AGTCAGGAGC AGCTCAAAGA TTTGTTGGCT
CTTGCTAAAA AGATTAAAGG AAATCCAGCT GAGTACCGTA ATGCGCTGGA TGGGAAGAGT
GTGGTTATGC TATTTGAGAA GCCCTCTTTA AGAACCCGTG TTAGTTTTGA TATCGGTATT
AATAAGTTAG GAGGTCATTG TCTCTATTTG GATCAGCAAA ATGGTGCGCT GGGTAAACGC
GAGCCCGTTT CTGATTTTGC TGCCAATATT TCCTGTTGGG CCGATGCTAT TGTGGCGAGA
ACCTTTCTTC ACTCGACTAT TGAGGGCTTG GCTGAGCATG GAAGTGTGCC GGTGATAAAT
GCTTTATCAG ATCTGTATCA CCCCTGTCAG GGATTAGCCG ACTTTTTAAC CCTGTCTGAG
AAATTTGATG ATGTCAGCAA GGTAAAACTG GCATACGTCG GTGATGGAAA TAATGTGACG
CATTCACTCA TGTATGGGGC GGCTATTTTG GGTGCGACAA TGACAGTTAT CTGCCCTCCT
GGGCAGTTCC CCGACGGGCA GGTGGTTGTG GAAGCTCAAT CTTTAGCGGC TCAGCATGGC
GGTCAGTTAA TACTCACTTC TGACATTGAA GAGATCGCTC AGCAAGATGC TATCTATACT
GATACTTGGA TCTCTATGGG AGACGATTCT AATCTGAGTG ATATCGAGGC TAAATTTAAA
CCCTATCAAG TTAATGCTGC AATGATGAAG AAAGCGGGCG CTAACTTCTT TATGCATTGT
CTGCCTGCAT ATCGTGGTGT TGAAGTTACT GCCGATGTAG TCGATGGCGA AGGTTCACTT
ATTTTGCAAC AGGCTGAAAA CCGCATGCAT GCACAAAATG CAGTACTTGT GACCCTATTG
GGTCAATAA
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| Protein sequence | MNHLLSIKDL SQEQLKDLLA LAKKIKGNPA EYRNALDGKS VVMLFEKPSL RTRVSFDIGI
NKLGGHCLYL DQQNGALGKR EPVSDFAANI SCWADAIVAR TFLHSTIEGL AEHGSVPVIN
ALSDLYHPCQ GLADFLTLSE KFDDVSKVKL AYVGDGNNVT HSLMYGAAIL GATMTVICPP
GQFPDGQVVV EAQSLAAQHG GQLILTSDIE EIAQQDAIYT DTWISMGDDS NLSDIEAKFK
PYQVNAAMMK KAGANFFMHC LPAYRGVEVT ADVVDGEGSL ILQQAENRMH AQNAVLVTLL
GQ
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