| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4265 |
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| Symbol | aroK |
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| ID | 5611711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5234834 |
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| End bp | 5235349 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640935225 |
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| Product | shikimate kinase I |
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| Protein accession | YP_001475997 |
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| Protein GI | 157377397 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00401521 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.220429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGAGA AACGAAATAT TTTCCTCGTA GGCCCTATGG GGGCTGGTAA AAGCACTATA
GGGCGTCATC TAGCGCAGAT GCTGCACCTA GATTTCCACG ATTCAGATCA AGAAATTGAA
AGCCGCACTG GTGCGGATAT AGCGTGGGTT TTTGATGTCG AAGGCGAAGA AGGTTTCCGC
GTTCGTGAAA CACAAGTAGT CGCTGATTTA ACTGAAAAAC AAGGTATTGT TTTAGCGACA
GGCGGTGGTT CTATTCAGAG TAAAGAGATT CGTAATAACC TCTCTGCTCG TGGAATTGTC
GTATATCTAG AAACTACAAT CGATAAGCAA GTTGCTCGTA CTCAACGAGA TAAGCGACGC
CCATTATTGC AGGTAGACGA TCCAAGAGAA GTTTTGGAAA ATCTGGCTGC GACTCGTAAT
CCTTTGTACG AAGAGATTGC AGATGTCATC GTAAAGACTG ATGAGCAAAG CGCCAAAGTG
GTTGCGAATC AAATTATTGA ACAGTTAGGT TTCTAG
|
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| Protein sequence | MAEKRNIFLV GPMGAGKSTI GRHLAQMLHL DFHDSDQEIE SRTGADIAWV FDVEGEEGFR
VRETQVVADL TEKQGIVLAT GGGSIQSKEI RNNLSARGIV VYLETTIDKQ VARTQRDKRR
PLLQVDDPRE VLENLAATRN PLYEEIADVI VKTDEQSAKV VANQIIEQLG F
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