| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4262 |
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| Symbol | |
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| ID | 5611708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5231391 |
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| End bp | 5232230 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640935222 |
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| Product | site-specific DNA-methyltransferase (adenine-specific) |
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| Protein accession | YP_001475994 |
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| Protein GI | 157377394 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0338] Site-specific DNA methylase |
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| TIGRFAM ID | [TIGR00571] DNA adenine methylase (dam) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0349455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAA AACAGAGAGC CTTTCTTAAG TGGGCTGGCG GGAAATTCAA ACTGATTGAA
GCACTCTCAG AGCATCTTCC TGAGGGGAAG CGCCTGGTCG AGCCTTTCGT TGGCGCGGGT
TCTGTATTTC TAAATACAAA TTACTCAAGT TACCTTCTGT GTGATATCAA TCAGGATCTG
ATCAATCTAT ATAAGATTGT TCAGACTGAG CCTGAGCGAT ATATTGCGGC GGCTAAAGCG
ATGTTTGTAC CTGAGATGAA TGAAAAGGAA GCGTATTATA GAGTTAGAGC CGAATTTAAC
TTAAGTAGCG ACCCATTTCT TCGTTCTGTC TATTTCTTAT ATATGAATCG CCATGGTTTC
AATGGTTTGT GTCGATATAA TCGTAAAGGC GGATTCAATG TGCCTTTTGG AACTTATAAG
AAACCTTACT TCCCGGAAAA AGAGATCAGA TTTTTTTCAG AGAAAGCTCA ATGCGCTGAG
TTTCGCTGTA TAGGGTATGA AGAGGCATTT GATTTAACGA CTGACGGTGA TGTTGTTTAT
TGCGATCCGC CATACGCACC TCTTTCAACT ACAGCCAGCT TTACGACTTA TGTCGGTGCC
GGTTTTAGCT TAGATGATCA AGCCCTGCTT GCTCGTAAGT CTCGCCATAC TGCGATTGAG
CGCGGCTTCC CTGTTTTAAT CAGTAACCAC GATATACCTC TGACGAGGGA GCTTTATCAT
GGCGCTCGAT TCGATACGAT TCAGGTGCAG AGAAATATCA GCCAAAAAGG CAGTGGACGC
AAGAAAGTCG ATGAATTAAT GGCTTTGTAC GATGACCGTT ATCATAGTGA AAACGATTAA
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| Protein sequence | MSKKQRAFLK WAGGKFKLIE ALSEHLPEGK RLVEPFVGAG SVFLNTNYSS YLLCDINQDL
INLYKIVQTE PERYIAAAKA MFVPEMNEKE AYYRVRAEFN LSSDPFLRSV YFLYMNRHGF
NGLCRYNRKG GFNVPFGTYK KPYFPEKEIR FFSEKAQCAE FRCIGYEEAF DLTTDGDVVY
CDPPYAPLST TASFTTYVGA GFSLDDQALL ARKSRHTAIE RGFPVLISNH DIPLTRELYH
GARFDTIQVQ RNISQKGSGR KKVDELMALY DDRYHSEND
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