Gene Ssed_4261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_4261 
Symbol 
ID5611590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp5231176 
End bp5231337 
Gene Length162 bp 
Protein Length53 aa 
Translation table11 
GC content44% 
IMG OID640935221 
Producthypothetical protein 
Protein accessionYP_001475993 
Protein GI157377393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0285168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCAGTA CTCTGGCTGC TTTCTTCGGT GTCCAGAGTG AGAAAAACAG AAAGCGAGAC 
TTCCAAGCAA GCTCTCCCCT CCCATTTATC ATTATGGGCA TAGTGCTCGC GATAGCCTTA
GTATTCACCT TACTGTTTAT CGTTAGAAAA GTGTTGGGCT AA
 
Protein sequence
MISTLAAFFG VQSEKNRKRD FQASSPLPFI IMGIVLAIAL VFTLLFIVRK VLG