| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4247 |
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| Symbol | |
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| ID | 5613604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5216039 |
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| End bp | 5217568 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640935206 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475979 |
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| Protein GI | 157377379 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.102223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000249407 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACAAATT CCGCAACGAT GACTGAACAA CACGCCATAT TAAAAACACT TGTCGATGAC
ATTGATAATA TAAGAGCTCA AGCTAATGAA CTGCTTGATA ATGAGACTCG AGGCCGAAAA
GGGCAGTTCA TGACTCCTGC TTCAGCAGCT AATATTCTTG CGGAGATGTT TCGAAATCTT
GACGGTGACC TAAAAATACT AGACGCTGGC GCTGGTGTGG GCTCTTTAAC CACTTCACTT
GTTGAACGTG CTCTACGTGA GTTTCAACCA ACTTCTATCA ATGCTAACGC TTGGGAGCTG
GAAGACGTTC TAGTTGAAAA CTTGAACCGT TCTTTTGCAT TTTGCCAAGA AGCTAGCGAT
GAATCTCAAG TCGCTTGGAA CTCGGAAGTA AACCAAGTTG ATTTCATTCA AAACGCAGTT
GAGCTGTTAA AAACACGTGA AAACGGCGAA GAAACGGCTA CGTTCAACAA AGCTATCTTG
AACCCTCCGT ACTTGAAAAT TGCTGCCGCT AGTAAAGAGC GTAAAAGCCT ACGTAGCGTT
GGTGTTGAAG CGTGTAACTT GTATTCTTGC TTCGTTACGT TGGCTTTGAT GCTTCTAGAA
GACGGTGGTG AGCTTGTAGC GATTACTCCA CGTAGTTTCT GCAACGGTCC ATACTTCAAC
GATTTCCGTC GAATCCTGCT TGATGGTAAC AATCTAAGCA AACTGCATAT CTTCGAAAGC
CGAACTAGAG CGTTCAAAGG CGACAAGGTT CTTCAAGAAA ACGTAATCTT CCATATCGTA
AAAGGTGAAG CTCAAGGTCA AGTCGAGATT ACATCAAGTA CATGTGCCGA TGACCCTGCA
CCGATTGTTC GCATGACTGA GTTTAACGAA GTAGTGAACC CGAATAACCC AGACCGTTTT
ATTCACATCG TTACTAACGA TGAACAAGCT GGTATCGCTA CTCGCATTGG CGGTATGCCT
TGTTCGCTAG AAGACCTTGG CATTCAAGCT AGTACTGGTA AAGTTGTTGA TTTTCGTACT
AAATCGAATC TACGCCATGA CCCAGAAGAA GATACGGTGC CGCTTATCTA CCCTATGCAC
TTCAACAACT GCATGATTGA ATATCCAGTA GAAAGCAAGA AAAAACCAAA CGCTATTGCA
TTGAACGATG AAACAATGAA ACAGATGGTC CCGAACGGTA CTTACGTTCT AACCAAGCGT
TTAACTTCAA AAGAAGAAAC ACGTCGTATC GTTGCAGGTT TGTACACGGC TGATTTAGCC
AATGTCGAAG TAGTAGGTTT CGAGAACAAA ACGAACTACT TCCACGCAGG TGGTCAACCG
CTAGAAATGG GCTTCGCAAA AGGTCTATGG GTTTACTTGA ACAGCCACAT CGTTGACCAG
TATTTCCGTC AGTTCAATGG CCACACGCAA GTTAACGCTA CTGACTTGAG AACTCTTCGC
TACCCTACTC GTGAACAGTT AATAGCTATG GGTGAACAAG TAGAAAAATT CGACCAAGAG
CTATTTGATG GTCTTGTTGG AAATCTATAG
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| Protein sequence | MTNSATMTEQ HAILKTLVDD IDNIRAQANE LLDNETRGRK GQFMTPASAA NILAEMFRNL
DGDLKILDAG AGVGSLTTSL VERALREFQP TSINANAWEL EDVLVENLNR SFAFCQEASD
ESQVAWNSEV NQVDFIQNAV ELLKTRENGE ETATFNKAIL NPPYLKIAAA SKERKSLRSV
GVEACNLYSC FVTLALMLLE DGGELVAITP RSFCNGPYFN DFRRILLDGN NLSKLHIFES
RTRAFKGDKV LQENVIFHIV KGEAQGQVEI TSSTCADDPA PIVRMTEFNE VVNPNNPDRF
IHIVTNDEQA GIATRIGGMP CSLEDLGIQA STGKVVDFRT KSNLRHDPEE DTVPLIYPMH
FNNCMIEYPV ESKKKPNAIA LNDETMKQMV PNGTYVLTKR LTSKEETRRI VAGLYTADLA
NVEVVGFENK TNYFHAGGQP LEMGFAKGLW VYLNSHIVDQ YFRQFNGHTQ VNATDLRTLR
YPTREQLIAM GEQVEKFDQE LFDGLVGNL
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