| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4238 |
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| Symbol | |
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| ID | 5614029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5203441 |
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| End bp | 5204655 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640935197 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475970 |
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| Protein GI | 157377370 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00134232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000545426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGATCCGCT ATACACTTGC TGCTTCCTGT ATCGCCCTGG CACTGGCCGC TAATGCTAAT
GCCACGCCGG TAGACGAAGA GCTGGAGGCC CTTAAGGCCC GTATCGAGCA ACTGGAATCC
GAGCAGACAC CGGTAACAGA AGAAAAGGAA AATGCCATTA AGTTTGGCGG TGCGGCTCGT
TTCCAATACT CCTATGAAGA CTATGATGTT GATAATAAGG ACCGTGGTGG TGATTTTGAC
TTCGACGTAT TCCGCATCGA TGTTAATGGT AACGTCGATG ACGTTATTTT TTCTGCCCAG
TACCGCTGGC ACCAGTACAT GGATGTCATT CACCATGCCT GGGTCGGTTA CAACTTCGAT
GAAAAGCAAC AGGCTAAAAT TGGTATAACT CAGGTGCCTT TCGGCATTTT GACCTGGGCG
TCCAATAGCT TCTTCTTCAG CTCAAACTTC TATACAGGGT TGGAAGACGA CTACGACATG
GGTCTGAACT ACACCTATAA CGGCGATGCT AACCGCCTGG ATCTGGCCTT CTACAAGAAT
GATGAACAGG GCGGTCTGGA TGGGTATGTA TCCGATCGTA GCGAGCGTTA TTCCTACGAT
GTGGTCGGTG TTCGTTTAGC AGGCGAAGGG ATCTATGATG CCCCAAGCGA AGGCAAGGCT
GCGGCTGAAA GCAACACCCT CAACGCGCGC TATGCTCACA ACCTGGCGTT CGGTGATGTT
GCAGTTGAGC TGGGTGTATC CGCCCAGGCT GGTCAACTGG AAATTCAAGA CGGTACCGAT
GGCGATCACG TGGCTGCAGC ACTGCATAGT GTGATCAACT ATGACCGTTG GAACGTTAAG
CTACAGCTGA CCGACTACAC GTACGATGTC GATGGTATGG ATGTTGAACG TATGGTAGTG
GGCGCCTATG CCTTCTATGA CTCTATCCCA GCAGAGGCCA CCAGCTACGT GGCCAACGTG
GCCTACAGCC TACCTGTTAG CATGGGGCCG ATTTCAAACC TGACGTTCTA TAATGATTAT
TCGCTTGTCA CCGACAAGCC CGGCGTTCAG GAAGACACCT TTATGAACGT CACCGGCGTC
GCTATCACCG CTGGGGGCCT TTACACCTAC GTCGACTTTG TTGTCGCCGA GAACCAGCCC
TTCATCGGTG GCTCTATGGT GGGTGACGGT GAGACCAATA AACGCCTGAA CATTAACTTC
GGTTACTATT TCTAA
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| Protein sequence | MIRYTLAASC IALALAANAN ATPVDEELEA LKARIEQLES EQTPVTEEKE NAIKFGGAAR
FQYSYEDYDV DNKDRGGDFD FDVFRIDVNG NVDDVIFSAQ YRWHQYMDVI HHAWVGYNFD
EKQQAKIGIT QVPFGILTWA SNSFFFSSNF YTGLEDDYDM GLNYTYNGDA NRLDLAFYKN
DEQGGLDGYV SDRSERYSYD VVGVRLAGEG IYDAPSEGKA AAESNTLNAR YAHNLAFGDV
AVELGVSAQA GQLEIQDGTD GDHVAAALHS VINYDRWNVK LQLTDYTYDV DGMDVERMVV
GAYAFYDSIP AEATSYVANV AYSLPVSMGP ISNLTFYNDY SLVTDKPGVQ EDTFMNVTGV
AITAGGLYTY VDFVVAENQP FIGGSMVGDG ETNKRLNINF GYYF
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