| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4232 |
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| Symbol | |
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| ID | 5613408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5196891 |
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| End bp | 5197760 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640935191 |
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| Product | carbonate dehydratase |
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| Protein accession | YP_001475964 |
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| Protein GI | 157377364 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000232431 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCAACT GGGAAGGTGT AAGCGAATTT GTTGCCGTTG CAGAGGCAGA GAGCTTTACC
AAGGCCGCAA AACGGCTTGG AATATCAACC GCGCAGGTCA GCAGGCAGGT CAGCGCATTA
GAAACCCGGA TGGCAACTAA GCTGTTTCAC CGCACCACAC GTAAAGTGTC GGTGACCGAA
GTGGGCCGGA TCTATTATCA ACACTGCAGA CAGGTGCTGG ACGGATTAGA AGAGGCCGAG
CGCGCCATAA CCAATTTGCA GAGTACACCG AGAGGGCTGT TAAAAATCAC CGCCCCGGTT
ACTTATGGTG AAAGAACGCT TGCGCCGCTG GTGAACGACT TTATCGCTAA ATACCCGGAG
CTTGAAGTAA AGGTAAGTCT GACGAATCAG AAGGTTGACT TAATAGATGA GGGGTACGAT
CTCGCGATTC GACTGGGACA ACTTGAAGAC TCGAGTATGA TGGCCAAAAG GCTGGGCTCC
CGAACTCAAT ATGTCTGCGC CTCCCCGGGT TACGTTTCAA CGTTTGGCAT ACCTCACTCA
CTGTCGGAGC TGGAACAACA TAACTGCCTG CTGGGAACAT TAGATTACTG GCGATTTCAG
GAAAATGGTA AGACAAGAAA TGTCAGGGTC AAGGGCAATC TAAGCTGTAA CAGTGGCCAC
GCCCTCGTCG ATGCTGCGAT AAAAGGCATA GGCATCATTC AGTTACCTGA CTACTATGTC
TTGCCTTATC TGGAAGATGG CCAGCTTATT CCGCTACTGG AGCAAAACCG CCAACCCGAC
GAGGGGATCT GGGCACTCTA TCCTCACAAC AGGCACTTGT CGCCTAAGGT ACGCATGCTA
CTCGACTATT TAAGTGAGGC ATTAGAATAA
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| Protein sequence | MFNWEGVSEF VAVAEAESFT KAAKRLGIST AQVSRQVSAL ETRMATKLFH RTTRKVSVTE
VGRIYYQHCR QVLDGLEEAE RAITNLQSTP RGLLKITAPV TYGERTLAPL VNDFIAKYPE
LEVKVSLTNQ KVDLIDEGYD LAIRLGQLED SSMMAKRLGS RTQYVCASPG YVSTFGIPHS
LSELEQHNCL LGTLDYWRFQ ENGKTRNVRV KGNLSCNSGH ALVDAAIKGI GIIQLPDYYV
LPYLEDGQLI PLLEQNRQPD EGIWALYPHN RHLSPKVRML LDYLSEALE
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