| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4230 |
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| Symbol | |
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| ID | 5611439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5194773 |
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| End bp | 5195270 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640935189 |
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| Product | glutathione-dependent formaldehyde-activating enzyme |
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| Protein accession | YP_001475962 |
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| Protein GI | 157377362 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3791] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02820] S-(hydroxymethyl)glutathione synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.730095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000566631 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGTTGTGTA AGTGCAGCAG CAAGCCCGTT GAAGTTACTG TCGGTGCTCA GACTGCCCAC
AATCATGTTT GTGGCTGTAG CAAATGCTGG AAGCCTGAAG GTGCCTTGTT CGCTCAAATA
GCCGTTGTGT CAAGAGATCA CGTGAGCGTC ACTGCAAATG CAGACAAGTT AGCCATTGTC
GATGAGTCAG CAGCAATTCA GCGTCATGCT TGCAGAGAGT GTGGTACCCA TATGTATGGC
CGCATCGAAA ACACGGGCCA CCCTTTCCAC GGTCTGGACT TCATCCACAC CGAGCTGTCA
GCAGAAAAGG GCTGGTCAGC ACCGGAATTT GCAGCGTTTG TCTCATCTAT CATCGAGTCG
GGTGCAGCGC CTGAATCTAT GGGGGATGTG CGTAACACCC TCAAAGAGTT GGGACTCGAG
CCCTACGACT GTCTGTCTCC TGTATTGATG GACGCAATTG CTACTCATGT CGCCTCTCAC
GTTGTGAGCA ATGGCTAA
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| Protein sequence | MLCKCSSKPV EVTVGAQTAH NHVCGCSKCW KPEGALFAQI AVVSRDHVSV TANADKLAIV
DESAAIQRHA CRECGTHMYG RIENTGHPFH GLDFIHTELS AEKGWSAPEF AAFVSSIIES
GAAPESMGDV RNTLKELGLE PYDCLSPVLM DAIATHVASH VVSNG
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