| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4220 |
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| Symbol | |
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| ID | 5611498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5185226 |
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| End bp | 5186446 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640935179 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475952 |
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| Protein GI | 157377352 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2966] Uncharacterized conserved protein
[COG3610] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAACG AAGAATTTCT AGAGAAACGT CGATTTATCA TTAAGTTAGG CAAGTCTCTA
CACAAGTTTG GCACCCCGGC TTACCGGCTC GAAGCTCACC TTCAAGCCGT CTCAGAACTC
TTGGGACTCG AGGGCTATTT TCTTATCTCT CCCACTGCCA TGACCTTCGT TCTTCAACAC
GATACCGATC AAGAGTACAA CCACGTAGCC AGGGTAAAGC CGGGTGAATT AGATCTCGGA
GCCCTGGCCC GTACCGATGA ACTGGTCGAG GAGTTAGTTT CTGGTAAGCG CACTCTTCAG
GAAGCCTTAG AACGACTGGA CGAGATAGCC AATAAACCTA ATGCTTATGG CTCACTGCTC
ACCTTATTGG CATTTGGCTG CTCGGCAGGA GCCTTTGCCA TGCTGATGGG AACAAGCTGG
AACGATGTGT TTTGGTCTGC CCTGCTTGGT TTCATGGTCT ATGGACTGGT CTATCGCGCC
GAACGCTCTA AACGTATGGC CGAAATGCTC GAACCTTTAG CCGCTATCCT ATGTGCCCTG
GTCGCCAGTG GCATCGCTCA ACTTGATCCC CATATCAACC TCCCTGTGGT GATTCTGTCC
GGCATCATTA TCTTTGTTCC CGGTCTCGCG CTCACCTTAG GCTTAGCTGA GCTCGCTGCC
AGAGATCTGA TATCCGGGAC CGCCCGTGTC ATGGATGCGT GTATGCTGCT GTTTAAGCTC
TATTTTGGAG CAATTTTCGG CATGGTGATT GGCAAGGCGA TATTTGGCGA AGCCATCTAC
TTTGAACCCG ATCCGGTACC ACAAGTTGCC ATCTGGTCTG CCGTGCCTAT CCTCTCGATG
GCACTGGTGA TCATATTTAA GGCCCGTATG AAAGACTCCC CTTGGGGAGT GCTCGCAGGC
ATTGTCGCCT TCTTCTCATC TATGTTGGGT GGCATCTACT TAGGCGACTC TATCGGTATC
TTCTTTGGCG CGTTCGCAGT GGGCGTCTAC TCAAACCTGT TTGCACGCTG GATGAAAGCC
CCCGCTTCTA TCGCCCTACT CCAAGGTATC GTTATTCTGG TTCCGGGTAG TAAAACCTAT
ATTGGACTCA ACACGCTTAT CTTAGGCGAG ACAATGCTTA ACCAGTCACA TATTGGTAGC
CAGATTTTTC TGATATTTAT GTCACTCGTC GCCGGATTAA TTTTCGCCAA CGTCGCCGTA
TCACCGCGAA GAACGCTATA A
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| Protein sequence | MNNEEFLEKR RFIIKLGKSL HKFGTPAYRL EAHLQAVSEL LGLEGYFLIS PTAMTFVLQH
DTDQEYNHVA RVKPGELDLG ALARTDELVE ELVSGKRTLQ EALERLDEIA NKPNAYGSLL
TLLAFGCSAG AFAMLMGTSW NDVFWSALLG FMVYGLVYRA ERSKRMAEML EPLAAILCAL
VASGIAQLDP HINLPVVILS GIIIFVPGLA LTLGLAELAA RDLISGTARV MDACMLLFKL
YFGAIFGMVI GKAIFGEAIY FEPDPVPQVA IWSAVPILSM ALVIIFKARM KDSPWGVLAG
IVAFFSSMLG GIYLGDSIGI FFGAFAVGVY SNLFARWMKA PASIALLQGI VILVPGSKTY
IGLNTLILGE TMLNQSHIGS QIFLIFMSLV AGLIFANVAV SPRRTL
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