| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4214 |
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| Symbol | |
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| ID | 5611861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5177032 |
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| End bp | 5177997 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640935173 |
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| Product | formate dehydrogenase, gamma subunit |
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| Protein accession | YP_001475946 |
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| Protein GI | 157377346 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
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| TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAG CAATAAGATT GTTTAGTTTT ATTGTCATCA GCCTGTTTGT CTCAACGGCA
GCAATGGCCG CTGATGTTGC AACATTGCAG CCTCAGCAGT GGCAAACTAT CCAGGAACAC
GCTATTGAGG GTGACATCCC AGAACTGCGT GGTATGCCAA CACAAGTTGA GTTATTGATG
CCTGCATCGG TACCGGAAGA AGCAGATGAA ACCATCTTAG GTTACTTAGG TGCCACAGAT
AGCATCGCAT TTCTGGTTTT TGCCAGCCTG TTTGGCGTCA TCGCCTTGTT TATCATCTTC
ATCATGGTGA ACGGTATCTC ACGTCTGGAT AACGGCTTCT CGGGTAAGAT GATCAAACGT
TGGTCTGGCT TAAGTATCAG TGTGCATTGG CTGGGAGCGA TTGCCTGCAT CCTGCTAATG
CTAACGGGTC TGGTCTTAGC GGGCGGTCGA CACTACTTCG AACCAAGCAT GAATGCATCT
AGCTGGACAT CGCTCGTCGG TCTGTCAAGC AGCCTGCATG AGCTAATGGC ATTCCCCTTC
ATCCTGGGTT ACATCCTGAT GATATTGATG TGGGCACCAA AGCAAATTCC AGCAAGCTAT
GACTTGAAGT GGTTTGCCGT ATTGGGTGGC TACCTGAATA CAGGTAAGAA GCATCACCCG
GATGCGGGCT TTGCCAATGC CGGTGAAAAA CTGTGGTTCT GGGTATTTGC ACTCTTTGGT
GGCCTGATGG TGATTTCAGG TCTGACAATG ATGTTCCCTG AAACCTTCGT TGTCACTAAG
AATACCGCTA ATTTGATGCT GGTAATGCAC ATTGCCTCAA CCATCATCAT CAGCGCCTTC
TCAGTAGTAC ACATCTTCAT GGCGACAGTC ATGTCTGAAG GTGGCATGTC TAACATGACC
TCTGGCTACT GTGACGAAAA CTGGGCGAAG CAGCACCATA ACCTTTGGTT CAACGAACTG
AAGTAA
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| Protein sequence | MNRAIRLFSF IVISLFVSTA AMAADVATLQ PQQWQTIQEH AIEGDIPELR GMPTQVELLM
PASVPEEADE TILGYLGATD SIAFLVFASL FGVIALFIIF IMVNGISRLD NGFSGKMIKR
WSGLSISVHW LGAIACILLM LTGLVLAGGR HYFEPSMNAS SWTSLVGLSS SLHELMAFPF
ILGYILMILM WAPKQIPASY DLKWFAVLGG YLNTGKKHHP DAGFANAGEK LWFWVFALFG
GLMVISGLTM MFPETFVVTK NTANLMLVMH IASTIIISAF SVVHIFMATV MSEGGMSNMT
SGYCDENWAK QHHNLWFNEL K
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