Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4205 |
Symbol | |
ID | 5611882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 5164209 |
End bp | 5164775 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640935164 |
Product | hypothetical protein |
Protein accession | YP_001475937 |
Protein GI | 157377337 |
COG category | [S] Function unknown |
COG ID | [COG2930] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGT TCATCTCAGC CATCTCTATC GCAACCTGTT TTATCGCCAC GATTTTCGCG ACCCAGGTTG CCGCTGCCGA TGACAGTTAC TCTGAAACTA TTGCGAATTT TAAACAAGCC AGTGACACCC ATAAATTTTT CAATAACGCC TATGGATACG CCCTATTTCC TACCGTAGGA AAAGGTGGGT TCGGCATAGG TGCCGCCTAC GGTAAAGGGC GGGTTTATAA AGGTAACAGC TATACGGGTG ATACCAGCCT CTCTCAGCTA TCTCTTGGCT TTCAGATTGG CGGCCAGGCC TACAGCGAGA TAATCTTCTT TAAAGATGCC AAAGCTTATA ACGAGTTTAC CAGTGGCAGC TTCGAATTTG GCGCTCAGGC CTCCGCCGTA GCGATAACCA TAGGCGCTAA CGCCCAGGCC GGAACCACAG GAAATTCCAG CAGCGCAGGC AAGGCTGCGG CAAAAGCGGC CTATATCAAC GGCATGGCGG TATACACCTT AGCCAAGGGT GGCCTGATGT TTGAAGCAGC CCTTGCGGGA CAGTCATTTA CCTTCGAAGA GAAGTAG
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Protein sequence | MKKFISAISI ATCFIATIFA TQVAAADDSY SETIANFKQA SDTHKFFNNA YGYALFPTVG KGGFGIGAAY GKGRVYKGNS YTGDTSLSQL SLGFQIGGQA YSEIIFFKDA KAYNEFTSGS FEFGAQASAV AITIGANAQA GTTGNSSSAG KAAAKAAYIN GMAVYTLAKG GLMFEAALAG QSFTFEEK
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