| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4186 |
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| Symbol | |
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| ID | 5612167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5145143 |
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| End bp | 5146276 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640935145 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475918 |
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| Protein GI | 157377318 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.13826 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA AATCCACCAA GTTCATGTTG TCGATGGTGG CAACAGCGAT AGCACTATCC
GGCTTTAACG CCAGTGCAGA AGAGCAGGAA GACGGGATCA ACATAGGCGG CGCGGTACGC
GTTAACTATG GCTACAAAGA TTACAGTGAA GCCTCGAAGG ATAAGGGTGG CGATCTGACT
TTCGATATGG CTGCCATCAA GTTTAACGGT AAGAAAGGTG ACTGGGGGTT AGCCGCAGAA
TACCGCTTCA CCTCTAGCAC TGACTACATC AAATACGGCT ACGGTATCTA CAATATCGAT
CCTGAGTGGC AGCTACAGTT TGGTATCAAC AAGGTGCCAT TCGGTAACCG CGAATTTATC
TCTAACAGCT GGTGGTTTGG TATTCCTTAC TACTTAGGTT TTGAAGACGA CCATGATGTC
GGTGTTAAGG CCGTTTATAA CAGCGGCGGC TGGCACACAG ACTTAGCCTT CTACAAGAAT
GCTGAGTATG GTCCAACAGA AAATAAGCGT TACGCGACCG ATCTATACAC AGGCACCATC
AATGGCACCG AGTATAACAA CGAAGAGACA AACCAGGTTA ACCTGCGTCA GACCTTTACT
GCTGAACATG AAGGCGGCTC AACGACCTTC GGTGGCTCTG TTCAATATGG TCAGATCTAC
AACAACAAAA CCGGAAATAC CGGCGATAGC TACGCCGCGG CTCTTCACTT AGACAGCAGC
TACAATGGCT GGAACCTGCA GCTACAGGCG ATGCAATATG AATACGATGC GGCCGATTCG
GTCGATTCGA ACAAGATTGG TGTATCGGTA GTAAGCTGGC AATACGAGAT CGCCTCTAAG
GGCCAGGCCT ATAGCGCCAA CATAGCTAAG ACCTTCAAGA CTGACTGGGG TAGTGTGAAG
TGTTATAACG ATTTCGGTCT TATGACACCT GACGTCGATG ACAGCAGCTA CGACAACAGC
ATGCAAAACG TCACAGGCTG TGCAGTTTCA GCAGGTCCAA CTTACACCAT GATCGACTTC
GTCATGGGCA AAAACATGAC CTTCTCAACC GCTAACAATG ACCATGTCGG TCTGCCAGAA
ATGGGCGATG ACTGGGACAA ACGCGTCAAC ATCAACTTTG GTTACTACTT CTAG
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| Protein sequence | MMKKSTKFML SMVATAIALS GFNASAEEQE DGINIGGAVR VNYGYKDYSE ASKDKGGDLT
FDMAAIKFNG KKGDWGLAAE YRFTSSTDYI KYGYGIYNID PEWQLQFGIN KVPFGNREFI
SNSWWFGIPY YLGFEDDHDV GVKAVYNSGG WHTDLAFYKN AEYGPTENKR YATDLYTGTI
NGTEYNNEET NQVNLRQTFT AEHEGGSTTF GGSVQYGQIY NNKTGNTGDS YAAALHLDSS
YNGWNLQLQA MQYEYDAADS VDSNKIGVSV VSWQYEIASK GQAYSANIAK TFKTDWGSVK
CYNDFGLMTP DVDDSSYDNS MQNVTGCAVS AGPTYTMIDF VMGKNMTFST ANNDHVGLPE
MGDDWDKRVN INFGYYF
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