| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4182 |
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| Symbol | |
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| ID | 5612263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5140736 |
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| End bp | 5141863 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640935141 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475914 |
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| Protein GI | 157377314 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.322884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA AGACACACTT TGCGCTTTCC GCGCTTGTGG CTGCGATGAC CATAGCGGGG
TTATCTGTTC CTGTAGCGGC AGAAGATGGT ATCGATGTCG GTGGCACGGT AAGAGTAAAC
TACGCCTATA AAGATTATAG CGAGGCATCT AAAGACAAGG GCGGCGATCT GACATTTGAT
ATGGCCGCCA TCAAATTCAA TGGTAAGAAA GGCGACTGGG GACTCTCTGC CGAGTACCGT
TTCACCTCGA GCACCGACTA TATCAAATAC GGCTACGGCT ACTACGACAT AAATACAGAC
TGGCAGCTAC AGTTTGGTAT CAACAAGGTG CCATTCGGTA ACCCGGGCTT TATCTCTAAC
AGCTTCTGGT TTGGCATCCC CTACTATTTA GGTTTCGAGG ATGACCATGA TATCGGTATC
AAAGCTGTCT ATGAGAGCAA TGGCTGGCAC ACAGATCTAG CCTTCTACAA AAACCCGGAA
TATGGCGCGA GCGAAAATAA ACGCTACGCC ACCGATCTCT ACACCGGCAC CATAAACGGC
ACCGAGTACA ACAACGAAGA GACCAATCAG GTCAACCTGC GTCAGACATA CACCACCGAA
TATCAGGGCG GCTCTACCAC ATTTGGTGGC TCTGCGCAGT TTGGTCAGAT CTACAACAGC
AAGACTGGCA ATACGGGCGA TCGCTACGCC GTCGCGCTTC ACTCAAATAG CACCTATCAA
GGTTGGGAGC TGATGCTGCA AGCGATGCAG TATGAATACG ATGCCGCCGA TGCTGTCGAC
CTTAATAAGA TCGGTGTCTC TGTGGTGAGC TGGCAATATG AAATTGCCTC GAAAGGCCAG
GCATACAGCG CGAATATCTC TAAAACCATC TCAACTGACT GGGGTAGCCT CAAGCTCTAC
AATGACTTCG GTTTGATGAC CCCGGATGTA GAAAACCAGA GCTATGATGA CAGCCTGCAA
AATGTCACCG GCGTCGCGAT TGCGGCGGGA GCCACTTACA CCATGGTCGA CTTCATCATG
GGTAAGAACA TGACCTTCTC GACCGCCAAT AACGATCACG TCGGCCTGCC AGAAATGGGC
GATGACTGGG ACAAGCGGGT CAACATCAAC TTCGGCTACT ATTTCTAA
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| Protein sequence | MMKKTHFALS ALVAAMTIAG LSVPVAAEDG IDVGGTVRVN YAYKDYSEAS KDKGGDLTFD
MAAIKFNGKK GDWGLSAEYR FTSSTDYIKY GYGYYDINTD WQLQFGINKV PFGNPGFISN
SFWFGIPYYL GFEDDHDIGI KAVYESNGWH TDLAFYKNPE YGASENKRYA TDLYTGTING
TEYNNEETNQ VNLRQTYTTE YQGGSTTFGG SAQFGQIYNS KTGNTGDRYA VALHSNSTYQ
GWELMLQAMQ YEYDAADAVD LNKIGVSVVS WQYEIASKGQ AYSANISKTI STDWGSLKLY
NDFGLMTPDV ENQSYDDSLQ NVTGVAIAAG ATYTMVDFIM GKNMTFSTAN NDHVGLPEMG
DDWDKRVNIN FGYYF
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