| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4174 |
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| Symbol | |
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| ID | 5612292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5132962 |
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| End bp | 5133882 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640935133 |
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| Product | putative acyltransferase |
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| Protein accession | YP_001475906 |
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| Protein GI | 157377306 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAATT TTTTACCTGG TCCAGTGCTA TATATCATCA GCTCGCTCCT GCTCGTCATC
AACACGACGA TTTGGGCCGG CTTGATCAGC ATAGGGGGGC TCATAAAACT TCTCCTTCCA
TTCACTGCCG GACGGAACTT TCTCACCAAG ATCATGAACA AATTCATGTG GTCCTGGGCC
ACCTGTAATG GCGGAATACT CTTCCTACTG GCAGATATCG AGTGGGACAT CGAAGGGTTA
GAGAAGTTGG ATAAACATGG CTGGTACCTG CTGATCAGTA ACCACCTCAG TGGCCTCGAT
ATTGCGGTAC AAACCTATGT ATTGCGCAAT CACATTCCTA TGCTGAAGTT CTTCCTTAAA
CGCGAACTGC TCTATGTTCC TCTGTTGGGC TTGGGTTGCT GGGCACTGGA CATGCCATTT
ATGAGCCGAA CCAGTCCTGC CAAACTGAAG AAGAATCCGA AACTTAAGGG TAAAGATCTG
GCATCGACAC GTCGTGCCTG TGAAAAATTT AAAACCATGC CGACCTCCAT CATCAATTAC
GTTGAGGGAA GCCGCTTCAC AGAAGAGAAG CGCATACGCC AGGACTCACC CTACCGTTAT
CTGCTGCGCC CTAAAGCGGG TGGCATCGCC TTCACGCTGT CAGCCATGGG TGAGCAATTT
ACTAACCTAC TCAATGTCAC CTTAGTATAT CCGGAAGCAG AGTCCGATCC CCTGTCTGAG
GTGATGCACG GTAAGATTAA GAAAATAACA GTAAAAGTAG AGGTGCTGCC GGTACCCGAA
GTCGATAATA AGCGCTACTT TTCCGAGGCT CAGTATCGTG TCGAATTCCA GCGTTGGTTA
AACCAGCTAT GGGAAGAGAA GGATGAGCAG ATCCATCAGG TGATGCTAAA AAATGGCGTA
GCCAAAGAAG ATAGGCCTTA A
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| Protein sequence | MLNFLPGPVL YIISSLLLVI NTTIWAGLIS IGGLIKLLLP FTAGRNFLTK IMNKFMWSWA
TCNGGILFLL ADIEWDIEGL EKLDKHGWYL LISNHLSGLD IAVQTYVLRN HIPMLKFFLK
RELLYVPLLG LGCWALDMPF MSRTSPAKLK KNPKLKGKDL ASTRRACEKF KTMPTSIINY
VEGSRFTEEK RIRQDSPYRY LLRPKAGGIA FTLSAMGEQF TNLLNVTLVY PEAESDPLSE
VMHGKIKKIT VKVEVLPVPE VDNKRYFSEA QYRVEFQRWL NQLWEEKDEQ IHQVMLKNGV
AKEDRP
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