| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4153 |
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| Symbol | |
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| ID | 5612570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5105490 |
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| End bp | 5106842 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640935112 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475885 |
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| Protein GI | 157377285 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4452] Inner membrane protein involved in colicin E2 resistance |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAATT TCTTCACTAC GGCTACCACT AACCTAACCC ATAAGATCAT CGTTCTTGTG
GGAATGTCAC TGCTCTCCTC CATTCCGCTT GGGCTTGTTA TGAACATGAC CTCGGACAGA
GAATACCTCT ATCACGACGT CGTTAATGAA ATTGGCCGTT CATGGGGAGA ACAACAGATG
ATAGCAGGGC CGGCGCTTGT CTTACCCTAT CGCTATGAGG TTGTTCAGGA GAAGAGCGAT
GACGAAGGAA AAACAGTAAA GTTTAAGAGC AGTTTCCAAG ATGAGTTGGT TATTTTGCCA
AAGGATCTGG ATCTGGATAT GGATCTGACC CACGACTTTC GCTCCAGAGG AATATACCAA
TCCTTAGTTT ACAGTGCCAT GGTCAGTGGC AAGGCTAAAT TCTCCATTCC TGAGATAAAT
ATCCCTAACC TTATCTCTCT GGAAGCTGAG AATGCCCGGC TGGTATTCGG CATATCAGCC
AATCAGGCGA TTGAGAAAAT TGAATCATTT GAAGTGACCA GTCCGAAAAC GACGTCATCA
AATATAAATA CCGTGGGCGA CATCATGCCG GGAACCGGAT TATCCCAACA ACCAGGACTG
GAGCGCGGCT TCCATCTGCC CATAGAATTG AATCTTAAAC AGACTCAATT TAATGTCGAC
TTTGCAATAC AATTTAGGGG ATCACAGGCC ATTAGTGCGC TGCCCTTAGG TGAGCAAACC
AACATCAGCA TCTCAAGCGA TTGGCCACAT CCCAGCTTTA ACGGGCTCTT ACCAACGACT
AGAGAGATCA CAGACTCTGG GTTTAAGGCT AATTGGCAGA TTAGCCACTT GACCCGTAAC
TACCCACAAG TGTTCACTAA ACAACTTGAA ATTAACCTTA CCGAGGTCGA AGCCAGCACG
GCGTTATTCG AACCCGTCAC CCACTATGGC AAAGTGGAGC GTTCGGTCAA ATATGGCATG
TTATTTATTG CATTAACCTT CATCATGCTT TTAATCTTTG AGCTTGGCCA ACAAAGCTCG
CTTAGCCTGG TTCAATACCT GCTGGTCGGC TGCGCAGTCA CTCTGTTTTA CCTGCTGTTA
CTCTCGTTAT CTGAACATTT AGTCTTCGCT CAAGCCTATA TGCTAGCAGC GAGTATCCCG
GTGTTATCTG TATCGTCTTA TGTCGCCAGC GCGACTGCCA GCATGAAAAA GGGAGGGATA
ATCGCGGCCA TGTTGGTTTG TCTGTACGCC GTACTTTACT CAATTTTAAG ACTTGAAGAT
TTCGCATTGC TGATGGGAAC GGGCTTGCTG CTTATAGCCC TCTTGGTTCT GATGTTCATT
ACCCGGCATA AGAATCTGCA CTGTGAAATA TGA
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| Protein sequence | MLNFFTTATT NLTHKIIVLV GMSLLSSIPL GLVMNMTSDR EYLYHDVVNE IGRSWGEQQM
IAGPALVLPY RYEVVQEKSD DEGKTVKFKS SFQDELVILP KDLDLDMDLT HDFRSRGIYQ
SLVYSAMVSG KAKFSIPEIN IPNLISLEAE NARLVFGISA NQAIEKIESF EVTSPKTTSS
NINTVGDIMP GTGLSQQPGL ERGFHLPIEL NLKQTQFNVD FAIQFRGSQA ISALPLGEQT
NISISSDWPH PSFNGLLPTT REITDSGFKA NWQISHLTRN YPQVFTKQLE INLTEVEAST
ALFEPVTHYG KVERSVKYGM LFIALTFIML LIFELGQQSS LSLVQYLLVG CAVTLFYLLL
LSLSEHLVFA QAYMLAASIP VLSVSSYVAS ATASMKKGGI IAAMLVCLYA VLYSILRLED
FALLMGTGLL LIALLVLMFI TRHKNLHCEI
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