Gene Ssed_4151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_4151 
Symbol 
ID5612427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp5104119 
End bp5104379 
Gene Length261 bp 
Protein Length86 aa 
Translation table11 
GC content43% 
IMG OID640935110 
Producthypothetical protein 
Protein accessionYP_001475883 
Protein GI157377283 
COG category[S] Function unknown 
COG ID[COG2960] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATC CAAAGAAAAT CGAAGAAGTT GCTAAGCAAC TGAGCGAAAA CCTGCCTAGC 
GGACTGAAGC AATTCGCTGG CGAGTTTGAA GAAAAAAGTA AGCAGATCCT TCAAAATCAA
TTGATGAAGT TGGATGTTGT CTCTCACGAA GAGTTTGAAG TACAACAACA TGTACTGCTA
AAGACACGTG AGAAACTTGA AGCCCTTCAG GCACAGGTAG AAGCACTGGA GAAGAGACTC
AACGAGAGTG AGAGCGAATA A
 
Protein sequence
MINPKKIEEV AKQLSENLPS GLKQFAGEFE EKSKQILQNQ LMKLDVVSHE EFEVQQHVLL 
KTREKLEALQ AQVEALEKRL NESESE