| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4144 |
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| Symbol | |
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| ID | 5612948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5089844 |
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| End bp | 5090554 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640935099 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475876 |
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| Protein GI | 157377276 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3672] Predicted periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0112437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGGCA GGCTTTATTG TAGTAAATTA GCATGCAGAA AAGTCTGCCA GTTCATATTA
ATGGCACTGA CTCTGGCCAT ATCATGCCTT TACGCTTCAC CCACGCAAAA ACTGGATAGG
GGCCATATTA CTTCGACACT CGAGTCCAAA TATGGTGAAC GCGCAGGTAA ACGAGCCAAG
GCATGGTTTA GGGTGCTTGA TGAGGCACAA GGGTTAAGCG AAAAAGAAAA GATGACTAAA
GTGAACAACT TTTTTAATCT TTTTCGCTTT GTCGACGACA TTAAACTTTG GGGTGATAGT
AACTACTGGT CGACCCCGAT GGAGTTTATC GGAGTTAACG GCGGTGATTG TGAAGACTTT
TCGATAGCAA AGTATTTCAC CCTGCTTCAG CTTGGCGTAC CAGAAGATAA GTTGCGGATC
ACTATGGTTA AAGCAACGAG CGTTAACCAA TATCATATGG TTCTGGCTTA TTACGAAACA
CCTTCTGCTA TCCCCTGGGT ACTCGATAAT CTAGATACAA GAATTAAACC CGCTACCCAG
AGAAAAGATT TAATACCGGT TTACAGCTTT AATGGTCGAC AGCTGTGGCT TAACAAGGAA
AAAGGACGAG GCGTTCTTGC AGGTTCCTCC AAAAAGCTTG CGAAATGGAA CGATCTCAAA
TATAGATTGG GTGTCGAAAG ACTTAGACAA CCAAAATTAA GATTGGAGTA G
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| Protein sequence | MNGRLYCSKL ACRKVCQFIL MALTLAISCL YASPTQKLDR GHITSTLESK YGERAGKRAK
AWFRVLDEAQ GLSEKEKMTK VNNFFNLFRF VDDIKLWGDS NYWSTPMEFI GVNGGDCEDF
SIAKYFTLLQ LGVPEDKLRI TMVKATSVNQ YHMVLAYYET PSAIPWVLDN LDTRIKPATQ
RKDLIPVYSF NGRQLWLNKE KGRGVLAGSS KKLAKWNDLK YRLGVERLRQ PKLRLE
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