| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4136 |
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| Symbol | |
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| ID | 5613192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5055180 |
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| End bp | 5056349 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640935091 |
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| Product | HemY domain-containing protein |
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| Protein accession | YP_001475868 |
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| Protein GI | 157377268 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG3071] Uncharacterized enzyme of heme biosynthesis |
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| TIGRFAM ID | [TIGR00540] hemY protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAGAA TTATGATCTA TCTCGGGATT ATCTTATTAG GCCTGTGTAT CAGCCCATTT
TTTGAAGGTA TGAATGGCTA CCTCTATTTT ACCGTGTGGG ATTATGAAGT CGAAACTGGT
GTGGTGTTTG CTGTTATCGC TCTGATTGTT TTTTATGGCT TACTACAGAT CCTGGAGTGG
GCAATTATCT TCTTACTAAA CCTGTTGTTT AGTAGCCGAT TATTACCAGA AAAATGGCGT
AAGAAAGCGG CAAAAAAACA TACTCTTATT GGGGCATTAG CCCTTGCCGA AGAGGACTGG
GCAACCGCCG AGAAAGCGAT GTCCAAGGGG GCGGAAAAGG GGGAACTCCC GGCTCTGAAC
CTGTTAGCAG CAGCGAGAGC GGCGCAGCAT CAAAACAATA CTGAAGCCAG GGATGAGTAT
CTGCTTCAGG CAGAAAACGA AAGATTAGCC GTTAAGGCTG TCGGTACCAC ACGTACCCGT
TATCTGCTTC AGCAAGGTGA GCTGGACAAA GCCAGAAAAG AGTTGGATAA ACTTTCCCCT
ACCAGTAAGA GTAAACTCCC GGTGCTCAGA CTCGCACTCG AGTTATACCA GGCTCAATCT
GACTGGCACT CGCTGAAGCT ACTGCTCCCA ATCATCAAGA AACGAAACCT GCTTTCAGGC
GAAGAGTTAA ATGAGCTCAT CATTTCAACG AATACTTCTT TGCTCGTTTC CGCTCAACAA
AGTAGTGAGC AGGATTTAGA GAAAGCCTGG CACTGGCTCA GCCGAGCCGA GAGAAAAGAG
ATGCGTTATC TGGCCATCTA CTGTGTCGGT CTAAATCTTT ATCAACGTAA GCCTGAGGCT
CTCAAATTAT TGATGAAACA ATTAAAGAGC TCAACTTCTC CAGACTTGTT ATCTGCTCTT
GCTGAGATTA TTTCACCAGC CGATGTTGAA GAGAGAAAGG TGATTTTCTC GCTTGAGAAT
AAATATGCTG AAGAGGTCAA TTTCCAGATC CTTCTTGCTA AGCTGTATCA ACAAAACAAA
GAGTATCGAC ACGCGACCAC ATACTGGCAA AAAGTCTGCA ATCTTCAACC CGACAAAGTC
TGCTGGCTTG CTCTGGCAGA ATCACAGGAG CATTTAGGTG AGCTCAACAA AGCCGTGAAC
AGCTATAGAA ATGCCGCTTC GTTTAGCTAA
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| Protein sequence | MIRIMIYLGI ILLGLCISPF FEGMNGYLYF TVWDYEVETG VVFAVIALIV FYGLLQILEW
AIIFLLNLLF SSRLLPEKWR KKAAKKHTLI GALALAEEDW ATAEKAMSKG AEKGELPALN
LLAAARAAQH QNNTEARDEY LLQAENERLA VKAVGTTRTR YLLQQGELDK ARKELDKLSP
TSKSKLPVLR LALELYQAQS DWHSLKLLLP IIKKRNLLSG EELNELIIST NTSLLVSAQQ
SSEQDLEKAW HWLSRAERKE MRYLAIYCVG LNLYQRKPEA LKLLMKQLKS STSPDLLSAL
AEIISPADVE ERKVIFSLEN KYAEEVNFQI LLAKLYQQNK EYRHATTYWQ KVCNLQPDKV
CWLALAESQE HLGELNKAVN SYRNAASFS
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