| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4131 |
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| Symbol | |
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| ID | 5613130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5048934 |
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| End bp | 5049263 |
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| Gene Length | 330 bp |
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| Protein Length | 109 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640935086 |
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| Product | frataxin family protein |
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| Protein accession | YP_001475863 |
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| Protein GI | 157377263 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1965] Protein implicated in iron transport, frataxin homolog |
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| TIGRFAM ID | [TIGR03421] iron donor protein CyaY |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.86894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATGA CAGACTCTGA ATTTCATCAA CTGGCCGATG AAATGTTTCA AGCCATAGAT
AACGCCATCG AGCAAGCCAT CGATGAACAG GATGCCGATA TCGACATTGA TGCCTCTGGA
AATGTGCTGC AGTTAGAGTT TCCGGATACA TCGAAAATTG TGATAAATAA ACAGGAACCC
TTGCATCAGA TCTGGGTTGC AACCAAGTTC GGTGGCTACC ATTTCTCTTT CGTGGAAGGT
CGGTGGATCG ATGAAAGAAA TGGCGGTGAG TTTATGCCGT TCGTTATCGA CTCTATTCAG
CGTCAAGGTG ACATCCAGCT TTCGCTATAA
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| Protein sequence | MAMTDSEFHQ LADEMFQAID NAIEQAIDEQ DADIDIDASG NVLQLEFPDT SKIVINKQEP
LHQIWVATKF GGYHFSFVEG RWIDERNGGE FMPFVIDSIQ RQGDIQLSL
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