| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4124 |
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| Symbol | |
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| ID | 5613455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5042477 |
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| End bp | 5043187 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640935079 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475856 |
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| Protein GI | 157377256 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG2846] Regulator of cell morphogenesis and NO signaling |
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| TIGRFAM ID | [TIGR03652] iron-sulfur cluster repair di-iron protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.403684 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTTA CAGAGCAAAC TGAGGTCTCC TTATCTGAAC AGCGTGTCGG TCAGCTTGTG
GCCGATGACT TTCGCTATGC CCATGTATTT AGTCAATTTG GTATCGATTT TTGCTGTGGT
GGGGGGCGAA CATTAGCCGC TGCCTGCGAC AAGGCCGGTA TCGCACTATC TGAAGTCGAA
ACGGCACTCA GTAAGATTAA CTCTGAAGGC CAAAAAGATG ATGCGCTTAA TCAATTGCCG
CTCGGTGAAC TCATTGACTA CATAGAAGCC AATCATCACG CCTATGTCAG AGAGAAGGCG
CCTCTGTTAA TGGAATACAG CCAGAAGATG GTACGAGCAC ATGGTGAACG TCACGCAGAA
ATTAAACCTT TTGCGGGCTG GGTACGCGCA TTAATCGACG ATCTGACTCC GCACCTGATG
AAAGAGGAGA AAATCCTGTT TCCGGCCATC AGAGCCATGG CTGCCGGCGA AACCGTCGAG
GGGTGCTTCG GCCATATCGG CAACCCCATC AATGCGATGC AGCATGAACA TGACGATGCG
GGTCATATGT TCGAGAAACT TCATGAGCTG ACCAATCATT TCCAGCCACC GGAGCATGCA
TGCACCACAT GGCGTGTTTG TTACGCGACG CTGGCCGAGT TCGAGGCTGA CTTAATGCAG
CACATTCACC TCGAAAATAA TATCCTCTTC CCTAAGGCAT TAGCCCTCTA A
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| Protein sequence | MSVTEQTEVS LSEQRVGQLV ADDFRYAHVF SQFGIDFCCG GGRTLAAACD KAGIALSEVE
TALSKINSEG QKDDALNQLP LGELIDYIEA NHHAYVREKA PLLMEYSQKM VRAHGERHAE
IKPFAGWVRA LIDDLTPHLM KEEKILFPAI RAMAAGETVE GCFGHIGNPI NAMQHEHDDA
GHMFEKLHEL TNHFQPPEHA CTTWRVCYAT LAEFEADLMQ HIHLENNILF PKALAL
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