| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4122 |
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| Symbol | |
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| ID | 5613453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5041002 |
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| End bp | 5041511 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640935077 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475854 |
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| Protein GI | 157377254 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.22167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.119493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAGA CAGTTCTCTC AATAACTTTG CTTGCAAGCC TATTTGGTGT TGTAGCAGAA
GCTAATTCAA TGCCCGATCC CTACGCCGAA CCTGCGGCGG CAATTCAAGC GCGCCAAGGT
GTTCACCGCC TCATGGGGGC TAGCCTGATG GATGCTGGCG CCATCGCCAC CGGTAAGAAA
CCGTGGAATG GTTTTACCAT GCTTAACCGT GTGGATTCGT TGGCAGGTTT ATCCATCATA
TATAACGATT TTTTCTTTGT GCCTGACTCC TTCACTGAAA GTAAGGCCAG TGATGACTTG
CTGGAACGTA AGGAGGAGTT TCAGAGCCGA TCTAAGGCGC TTAAAAATGC CACCCTTGGT
CTGCGTTTAG CGGTTCGAAA CCATGATGGT AATTCCAGTA TGAAAGCCGT AGTGACTACT
ATTCAGGCCT GCAATGCCTG TCATCAGAGC TTTATGAAGC CTGCAACAAG GTTGATTTTA
CCCCTGCCCG ATGCACCTGC CGGACATTAG
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| Protein sequence | MQKTVLSITL LASLFGVVAE ANSMPDPYAE PAAAIQARQG VHRLMGASLM DAGAIATGKK
PWNGFTMLNR VDSLAGLSII YNDFFFVPDS FTESKASDDL LERKEEFQSR SKALKNATLG
LRLAVRNHDG NSSMKAVVTT IQACNACHQS FMKPATRLIL PLPDAPAGH
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