| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4116 |
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| Symbol | |
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| ID | 5610241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5034518 |
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| End bp | 5035243 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640935071 |
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| Product | fumarate reductase cytochrome b-556 subunit |
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| Protein accession | YP_001475848 |
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| Protein GI | 157377248 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000750156 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGTGA GAACTTTACT TCCCGAAACA AGCATCCCTG GCATTGTAGG ACACCCCTGG
TCTGCAAAGG CAGATAAAAT TCAAAGTGTC ACAGGCATAT TACTTGGCTG TTTTTTATTG
GCTCACCTGC ATTTTGAGTC CAGTATCCTG CTGGGAAAAG AGGCCTTCTA TCAAGTCGTT
CAGATCCTCG AGGGGGGAAT GTTTAGTGAA ACGGGCCATG GTTTCCCCGT CGTTACCAAA
GTATTTTCCG TGTTTATTCT TATTGTCGTT ATGTTACATG CCGCTGTGGC ACTGAGACGT
TTTCCGGCTC AATTGGGACA ATGGCGAGCA CTGCGTCGTC ATATGAACGG CATTAACCAT
AAGGATAGCC ACGCCTGGTT TTGGCAGCTC GTTACCGGGT TTATTCTGTT TTTCCTGGCA
CCGGTACATG TCTTTACCAT GATAACGAAT CCTGAAATCG GGCCACACCT TTCCGCGGAG
CGTGTTTACC ATGCGAACGC CTGGTTACTC TACGCGCTGC TTCTTCCTGC CGTGGTTATT
CACGCCATGA TTGGTCTCTA TCGTGTCGCG GTTAAATGGG GCCTGACTGC AAACAGAAGA
GGCTTGAGAA AAATCATCAA GGTGTTGATC ATCTATCTGA TCGTCATCGG TTCATTGAGC
CTGCTCTCCT ACATGATAAT CGGTAGTGAT TTGGCGCTCC CTGTCCAACC CTTTGTGCCT
GAATAG
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| Protein sequence | MTVRTLLPET SIPGIVGHPW SAKADKIQSV TGILLGCFLL AHLHFESSIL LGKEAFYQVV
QILEGGMFSE TGHGFPVVTK VFSVFILIVV MLHAAVALRR FPAQLGQWRA LRRHMNGINH
KDSHAWFWQL VTGFILFFLA PVHVFTMITN PEIGPHLSAE RVYHANAWLL YALLLPAVVI
HAMIGLYRVA VKWGLTANRR GLRKIIKVLI IYLIVIGSLS LLSYMIIGSD LALPVQPFVP
E
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