| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4105 |
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| Symbol | |
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| ID | 5613135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5020015 |
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| End bp | 5021031 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640935060 |
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| Product | delta-aminolevulinic acid dehydratase |
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| Protein accession | YP_001475837 |
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| Protein GI | 157377237 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0404345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATATTA TTACTAGTGC TTTCCCTCAG CGTAGAATGC GCCGCATGCG TAAACATGAC
TTTAGCCGTC GTTTAATGGC TGAAAACCAG CTTTCGGTGA ATGATTTAAT CTACCCTATG
TTTGTATTAG AGGGTAACAA TCGTACCGAA GAGATCGCTT CTATGCCGGG GGTTGAACGC
TACTCTATCG ATCTTTTGCT TAAAGAAGCC GAAGAGATCG TCAAGCTGGG AATCCCGCTG
ATTGCACTTT TCCCAGTGAC TCCGAGTGAA AAGAAAACCC TCATGGCCGA AGAGGCTTAT
AACGCCGATG CTCTGGCGCA ACGTGCGGTT CGTGCACTCA AGGAAGCCTT CCCTGAGCTG
GGTGTCATGA CTGACGTCGC CTTAGACCCA TTCACGACTC ATGGTCAAGA TGGCATCATC
GACGAAGATG GCTATATTCT TAATGACATC ACTACCGAAA TATTAGTTAA GCAGGCGCTG
TCTCATGCCG AAGCGGGTGC CGACATTGTT GCCCCATCCG ATATGATGGA TGGTCGTATC
GGTGCGATTC GCCAGGCACT CGAAGAAGCC GGTCATGTGA ACACTCAGAT CATGGCATAC
TCGGCTAAGT ATTCATCAAA CTATTACGGA CCATTTCGTG ATGCCGTCGG CTCTGCGGGT
AACCTAAAGG GTGGTAATAA ACACAGCTAC CAGATGGATC CGGCAAATAG CGATGAGGCT
TTACATGAGG TTGCCCTCGA TATTCAGGAA GGTGCAGATA TGGTCATGGT TAAGCCTGGC
ATGCCTTACC TCGATATCGT AACCCGGGTT AAACGAGAGC TTGCCGTACC AACATTCGCC
TATCAGGTCA GTGGTGAATA TGCCATGCAT ATGGCTGCCA TCGAGAATGG CTGGTTGGCC
GAAAAAGCCA TCGTTATGGA GTCGCTACTC TGCTTTAAGC GTGCCGGCGC AAATGGCGTC
CTGACTTACT TCGCTAAGCG AGCTGCTCAG TGGCTAAAAG AGGATGAAGT GAAGTAA
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| Protein sequence | MNIITSAFPQ RRMRRMRKHD FSRRLMAENQ LSVNDLIYPM FVLEGNNRTE EIASMPGVER
YSIDLLLKEA EEIVKLGIPL IALFPVTPSE KKTLMAEEAY NADALAQRAV RALKEAFPEL
GVMTDVALDP FTTHGQDGII DEDGYILNDI TTEILVKQAL SHAEAGADIV APSDMMDGRI
GAIRQALEEA GHVNTQIMAY SAKYSSNYYG PFRDAVGSAG NLKGGNKHSY QMDPANSDEA
LHEVALDIQE GADMVMVKPG MPYLDIVTRV KRELAVPTFA YQVSGEYAMH MAAIENGWLA
EKAIVMESLL CFKRAGANGV LTYFAKRAAQ WLKEDEVK
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