| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4100 |
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| Symbol | |
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| ID | 5612170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5015467 |
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| End bp | 5015865 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640935055 |
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| Product | twin-arginine translocation protein, TatB subunit |
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| Protein accession | YP_001475832 |
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| Protein GI | 157377232 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1826] Sec-independent protein secretion pathway components |
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| TIGRFAM ID | [TIGR01410] twin arginine-targeting protein translocase TatB |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.994502 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGACG GTATCGGCTT TATGGAGCTA CTGTTGATCG GTATTTTGGG GCTGGTTGTA
CTTGGCCCTG AAAGACTCCC GGTTGCAGTC CGCTCAATTA CAGGTTGGAT CCGAGCCATG
AAACGTATGG CAAACTCTGT GAAAGATGAA CTTGAGCAAG AACTCAAGAT TGAAGAACTG
CATGCTGATC TTAAAAAAGC TGAAAGTCAG GGCCTCAAAA ATCTCTCTCC CGAGTTACAG
GAATCCATCG ATCAATTAAA AAGTGCAGCT CAATCTGTTA ATCGTCCCTA CAAGGTAGAA
GATATCTCTC CGGCCAGTTC GTCTGCGCCT GTGGATCCTG CACCTACAGA GACAAAAACA
GCTGAGACCA GCGCGAATTC TGAAAAACCG AACGGGTAG
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| Protein sequence | MFDGIGFMEL LLIGILGLVV LGPERLPVAV RSITGWIRAM KRMANSVKDE LEQELKIEEL
HADLKKAESQ GLKNLSPELQ ESIDQLKSAA QSVNRPYKVE DISPASSSAP VDPAPTETKT
AETSANSEKP NG
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