| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4096 |
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| Symbol | |
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| ID | 5610473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5012128 |
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| End bp | 5012883 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640935051 |
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| Product | ubiquinone/menaquinone biosynthesis methyltransferase |
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| Protein accession | YP_001475828 |
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| Protein GI | 157377228 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGAGG GCACACAGAA TAGTACCCAT TTCGGTTACA AAACAGTTGA AGCAGAGCAG
AAAGCCGATA TGGTAGCTGG TGTCTTTCAT TCTGTAGCAG CCAAATATGA CATCATGAAT
GATGTCATGT CCTTTGGTAT CCACCGCATG TGGAAACGCT TTACTATTGA AAGTGCCGGT
GCTCGTCCAG GAATGAAAGT ACTTGATTTA GCTGGTGGTA CAGGTGATCT AACAGCAAAA
TTCTCTCATC TTGTTGGTGA TAAGGGTCAG GTCACTCTTG CTGACATTAA CGACTCTATG
CTTAAAGTTG GTCGTGAAAA GTTAAGAGAC AAGGGTATCG TCGGCAATGT GAACTATGTT
CAGGCCAACG CAGAAGCACT ACCGTTTCCT GACAACCATT TCGATATCAT TACTATCGCC
TTCGGCTTAC GAAATGTCAC AGATAAAGAT TCGGCAATTC GTTCTATGCT ACGCGTGCTT
AAGCCGGGGG GAAAACTACT CATTCTTGAG TTTTCAAAGC CTCAACACGA TGTCATGCGT
AAAATTTATG ATCTATACAG TTTTAAAATT TTGCCAAAGA TGGGCTCACT CATCACTCAA
GATGCCGAAA GCTATGAGTA CCTGGCCGAG TCAATCCGCA TGCACCCAGA CCAAGATACC
CTAAAAGGTA TGATGGTTGA TGCAGGTTTT GAGCAGGTTG AATACACCAA TATGACAGAT
GGAATTGTTG CGCTACACAA AGGCTATAAA TTCTAA
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| Protein sequence | MSEGTQNSTH FGYKTVEAEQ KADMVAGVFH SVAAKYDIMN DVMSFGIHRM WKRFTIESAG
ARPGMKVLDL AGGTGDLTAK FSHLVGDKGQ VTLADINDSM LKVGREKLRD KGIVGNVNYV
QANAEALPFP DNHFDIITIA FGLRNVTDKD SAIRSMLRVL KPGGKLLILE FSKPQHDVMR
KIYDLYSFKI LPKMGSLITQ DAESYEYLAE SIRMHPDQDT LKGMMVDAGF EQVEYTNMTD
GIVALHKGYK F
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