Gene Ssed_4093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_4093 
Symbol 
ID5610611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp5009532 
End bp5009780 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content39% 
IMG OID640935048 
Producthypothetical protein 
Protein accessionYP_001475825 
Protein GI157377225 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCTA CAAATACGAT TGAAATTATT GGTTATTCTG CCTCAGTGAT GGTGGCAATT 
TCACTAATGA TGAAAGATAT TATCTGGCTT AGATGTTTAA ACTTTACCGG TTGCACCTTG
TTTGTGATCT ACGGTGTTTA TATCTCTGCA TGGCCAGTTG CCGGAATGAA TGCATTCGTT
GCCTGCATTA ATATCTATCA CTTAATTAAA ATCTACCGTA CAAGATCTCA GCCTGCTGTC
ACAGCCTGA
 
Protein sequence
MEATNTIEII GYSASVMVAI SLMMKDIIWL RCLNFTGCTL FVIYGVYISA WPVAGMNAFV 
ACINIYHLIK IYRTRSQPAV TA