| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4090 |
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| Symbol | |
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| ID | 5613660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5003935 |
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| End bp | 5005305 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640935045 |
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| Product | acetyl CoA carboxylase, biotin carboxylase subunit |
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| Protein accession | YP_001475822 |
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| Protein GI | 157377222 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0439] Biotin carboxylase |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGC CAAGTGAGCG ACCAATAAAT CGCGTGCTTA TCGCCAACCG AGGTGAGATA
GCACTCAGAA TACAGCGTGC CTGCGCCGAA CTAGGCATAG AAACGGTGGC CATTCATTCA
ACGGCCGATC GCCAGCAACT ACATCTGGAA TATGCCAGCC AAACACTCTG TATTGGGAAA
GCGCCGGCAT TAAACAGTTA TCTCAATATT ACCGGTATTA TTTCGGCGGC ATCGCTTTCA
AAAACAGATG CGATACATCC GGGGTACGGA TTCCTGTCAG AAAATGCCGA CTTTGCCGAA
CAAGTTGAAA GTAGCGGCTT TGTTTTCATC GGTCCAACCC CTGAAGTGAT TCGTCTAATG
GGTGACAAGA TCTCAGCCAT TGCGGCAATG AAGCAAGCCG GAGTGCCCAC CGTTCCGGGC
TCCGACGGAA GCTTAACCGA CAATCATCAG CATAATAAAA AGCTTGCAGA GCAGATAGGT
TACCCCGTAA TCATAAAAGC CACCGCCGGT GGTGGTGGAC GAGGCATGAG GGTCATAAAG
GGGGAAGCTG AGCTCATTCA GGCTATCGAA CTAACCCGGG CCGAGGCCTT GGCCGCATTT
GCCAATGACT CGCTATATAT GGAGAAGTAT CTTGAAACGC CTCGCCATAT TGAAATTCAG
GTGCTGTCTG ATGGCCAGGG AAACGCTATC CACTTAGGTG AGCGCGACTG CTCGATGCAG
CGAAAACATC AAAAGGTCAT CGAGGAGGCC CCTGCCCTAG GTATCGATGA GCAAACACGC
CATACCATAG GTGAGCTCTG TGCTAAGGCC TGCATAGAGA TAGGTTATCG CGGCGTTGGT
ACCTTCGAGT TTCTCTATGA AGCAAACCGG TTCTACTTTA TTGAGATGAA CACACGCATT
CAGGTAGAGC ATCCCATCAC TGAGATGATC ACCGATGTCG ATATTATCAA GGCGCAGCTG
GAAATTGCCT CAGGTTTACC TCTCAAACTT AAGCAGGAAG ATGTCCCCCT CAACGGTCAC
GCCATCGAGT GCCGGATCAA TGCAGAAGAT CCCGTTAACT TTGTCCCCTC GCCAGGCCTC
ATTACTCAGT TTCACGCCCC CGGGGGAATT GGTGTTCGCT GGGACTCTCA CCTCTATCAG
GGTTACAGCG TCCCTCCCTA TTATGATTCC ATGATTGGAA AACTGATCAC CTGGGGAGAG
GACAGAGCGA CCGCCATCGC ACGCATGCAG TTGGCGCTCA ATGAGCTAAA AATTGAGGGC
ATAAAAACCA ATATCCCTCT GTTAAAGAAG ATACTGGCTG ATGAAGGCTT CAGGCAGGGC
GGACAATCGA TACATTATCT TGAGAAAGAG ATCCTAGAAC CTAGGAACTA G
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| Protein sequence | MKLPSERPIN RVLIANRGEI ALRIQRACAE LGIETVAIHS TADRQQLHLE YASQTLCIGK
APALNSYLNI TGIISAASLS KTDAIHPGYG FLSENADFAE QVESSGFVFI GPTPEVIRLM
GDKISAIAAM KQAGVPTVPG SDGSLTDNHQ HNKKLAEQIG YPVIIKATAG GGGRGMRVIK
GEAELIQAIE LTRAEALAAF ANDSLYMEKY LETPRHIEIQ VLSDGQGNAI HLGERDCSMQ
RKHQKVIEEA PALGIDEQTR HTIGELCAKA CIEIGYRGVG TFEFLYEANR FYFIEMNTRI
QVEHPITEMI TDVDIIKAQL EIASGLPLKL KQEDVPLNGH AIECRINAED PVNFVPSPGL
ITQFHAPGGI GVRWDSHLYQ GYSVPPYYDS MIGKLITWGE DRATAIARMQ LALNELKIEG
IKTNIPLLKK ILADEGFRQG GQSIHYLEKE ILEPRN
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