| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4087 |
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| Symbol | |
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| ID | 5613657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5002058 |
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| End bp | 5002486 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640935042 |
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| Product | peptidyl-tRNA hydrolase domain protein |
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| Protein accession | YP_001475819 |
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| Protein GI | 157377219 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1186] Protein chain release factor B |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATTTTG CCATGATAAA AATTTCGAAC AGTGTCTCTC TTCAAGAAAA TGAGATTGAA
TGGCAATTTA TTCGCTCCAG TGGTGCGGGT GGTCAACATA TTAATAAGGT TTCTACTGCG
GCCCAAATCA TCTTCGATAT CAAGGCTTCA TCTCTGCCGG ATTTTTACAA GCAGGCACTC
CTTAAGAAAG CGGATCATCG CATCACAAAA AGCGGCAAAG TTATCATTAA GTGTCAGCAG
AGCCGTAGTC AAGACTTCAA CCGTCAGACA GCGTTAGCCC AATTCATCGA GCTTATCGCC
AGCGTGGCCA TCACTCAGAA AAGACGCATA GCCACCAAAC CCACAAAAGG CAGCCAACGT
AGGCGTGTTG ATGCAAAAAA ACAGAAAGGC GCAACCAAGG CGTTAAGACG AAGTAAGTCA
GATTATTAA
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| Protein sequence | MYFAMIKISN SVSLQENEIE WQFIRSSGAG GQHINKVSTA AQIIFDIKAS SLPDFYKQAL
LKKADHRITK SGKVIIKCQQ SRSQDFNRQT ALAQFIELIA SVAITQKRRI ATKPTKGSQR
RRVDAKKQKG ATKALRRSKS DY
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