| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4080 |
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| Symbol | |
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| ID | 5609933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4992904 |
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| End bp | 4993791 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640935035 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_001475812 |
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| Protein GI | 157377212 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1230] Co/Zn/Cd efflux system component |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACATG CCCACGCTCA TGATTTTGAA TCTAATAGTA AAAAGTTATA TATCGCCATT
ATTATTAACG TCATTCTGAC TCTGTTTCAG ATTGTCGGAG GTATTATGGC GGGGAGCCTA
TCTCTCTTAG CCGATGCCCT GCACAACTTC AGTGATGCCG GCGCTATCAT CATTGCCGTT
ATCGCACGTC GTATAGGTAA TAAACCTGCC AGTAGCCGCA TGACATTTGG TTATAAACGA
GCGGAAATTA TTGGCACATT AATCAACAGT GTCTCCTTGA TTGCCGTCGG TATCTATCTG
ATTGCCGAAT CTATCAACCG CTATTTTAAC CCGCAGCCGG TAGACGGTTG GATTGTCTTT
GCCGTTGCAG GCATCGCCCT GATCATCGAT ATCGCCACGG CACTGTTAAC TTACTCCTCC
GGTGCTAAAG ACAATCTCAA TATTCGCGCC GCATTTATCC ATAATGTCTC AGATGCCATG
GCCTCGGTGG CCGTTATCAT CGCGGGTATC TTGATCATCT ACTTCCAGTG GTATGTGGTC
GACCTCATCA CTACCGCAAT CATCTCTGTC TATGTGATCT ATCATGGCGC GATTTTGCTA
CGTAAGGCGA TTTTGATCTT GATGGAAGCC ACGCCTGAAG AGATAGATAT CGATAAAATA
AAAACCGAAA TTTGTAAACT TGAGCCTATC GAATCGATAG AGCATGTTCA TGTGTGGGAA
ATTTCCGATA AGCGTTACAT GTTTACCGCC AACCTAATTC TCGTCGATAA GAGTCAATCG
GAAGCCGCAT TGCAGCTCGT TAAACAGTGT TTAGCGACAG AGTTTAATAT TGAACATACC
ACCTTAGAGG TTATCGATAA GACTCAGGAT AATGGCCAAT GTGCCTAG
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| Protein sequence | MAHAHAHDFE SNSKKLYIAI IINVILTLFQ IVGGIMAGSL SLLADALHNF SDAGAIIIAV
IARRIGNKPA SSRMTFGYKR AEIIGTLINS VSLIAVGIYL IAESINRYFN PQPVDGWIVF
AVAGIALIID IATALLTYSS GAKDNLNIRA AFIHNVSDAM ASVAVIIAGI LIIYFQWYVV
DLITTAIISV YVIYHGAILL RKAILILMEA TPEEIDIDKI KTEICKLEPI ESIEHVHVWE
ISDKRYMFTA NLILVDKSQS EAALQLVKQC LATEFNIEHT TLEVIDKTQD NGQCA
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